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server.R
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server.R
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function(input, output, session) {
output$mapa <- renderMapboxer({
est_selec <- base_color |>
set_color()
mapboxer(
attributionControl = FALSE,
style = style, token = token_mapa,
bounds = sf::st_bbox(est_selec)) |>
add_source(as_mapbox_source(est_selec), id) |>
add_fill_layer(
fill_opacity = 0.75,
fill_sort_key = 1,
fill_outline_color = "gray",
fill_color = c("get", "color"),
source = id
#,popup = "<p><strong>Valor total:</strong> {{valor_mon}}</p>"
) |>
add_text_control(
text = "<h2> Average honeycombs by state </h2>",
pos = "top-left",
css_text = "background: transparent; color: black"
)
})
observeEvent(input$var, {
est_selec <- base_color |>
tidyr::replace_na(list(ingreso_medio = 0)) |>
set_color(input$var)
mapboxer_proxy("mapa") |>
set_data(est_selec, id) |>
fit_bounds(sf::st_bbox(est_selec)) |>
update_mapboxer()
})
output$bees_gen <- renderReactable({
tabla <-
stressor |>
filter(
state %in% input$var &
months %in% input$period &
year %in% input$year &
stressor %in% input$stress
) |>
group_by(state) |>
summarise(
`% colonies afected` = mean(stress_pct, na.rm = T)
) |>
na.omit()
tabla |>
reactable(
compact = T,
highlight = T,
bordered = T,
defaultPageSize = 7,
style = list(fontSize = 11),
columns = list(
state = colDef(header = icon("globe")),
`% colonies afected` = colDef(
cell = reactablefmtr::data_bars(
data = tabla,
text_position = 'outside-base',
box_shadow = TRUE,
round_edges = TRUE,
number_fmt = scales::comma,
fill_color = MetBrewer::met.brewer('VanGogh3'),
bias = 1.5,
icon = "bug",
background = 'transparent',
bar_height = 3
)
)
)
)
})
output$table_conc <- renderReactable({
x <-
bees[2:length(bees)] |>
filter(
state %in% input$var &
months %in% input$period &
year %in% input$year
) |>
rename(State = state, Year = year) |>
filter(State != "United States") |>
group_by_at(
input$type_table
) |>
summarise(
`Mean colonies` = mean(colony_n, na.rm = T),
`Losted colonies (%)` = mean(colony_lost_pct, na.rm = T)/100,
`Added colonies` = mean(colony_added, na.rm = T),
`Renovated colonies (%)` = mean(colony_reno_pct, na.rm = T)/100
)
if (input$type_table == "State"){
x |>
mutate(
state2 =State
) |>
filter(state2 != "Other States") |>
reactable(
defaultColDef = colDef(
headerStyle = list(background = "#364559", color = "#fff"),
format = colFormat(digits = 0, separators = TRUE )
),
highlight = T,
columns = list(
state2 = colDef(
name = "State Geometry",
cell = function(value){
img_src <- knitr::image_uri(sprintf("states_plot/%s.png", value) )
image <- img(src = img_src, height = "15px", alt = value)
tagList(
div(style = list(display = "inline-block", width = "45px"), image)
)
}
),
`Losted colonies (%)` = colDef(
align = 'left',
minWidth = 250,
cell =
reactablefmtr::data_bars(
data = x,
fill_color = '#EEEEEE',
number_fmt = scales::percent,
text_position = 'outside-end',
max_value = max(x$`Losted colonies (%)`+.03),
min_value = min(x$`Losted colonies (%)`-.03),
icon = 'circle',
icon_color = '#a35a5d',
icon_size = 15,
text_color = '#a35a5d',
round_edges = TRUE
)
),
`Renovated colonies (%)` = colDef(
align = 'left',
minWidth = 250,
cell =
reactablefmtr::data_bars(
data = x,
fill_color = '#EEEEEE',
number_fmt = scales::percent,
text_position = 'outside-end',
max_value = max(x$`Renovated colonies (%)`+.03),
min_value = min(x$`Renovated colonies (%)`-.03),
icon = 'circle',
icon_color = '#a35a5d',
icon_size = 15,
text_color = '#a35a5d',
round_edges = TRUE
)
),
`Mean colonies` = colDef(
align = 'left',
minWidth = 250,
cell = reactablefmtr::data_bars(
data = x,
fill_color = '#5a7ca3',
background = '#FFFFFF',
bar_height = 5,
number_fmt = scales::comma,
text_position = 'outside-end',
max_value = max(x$`Mean colonies`),
icon_size = 15,
text_color = '#000',
round_edges = TRUE
)
),
`Added colonies` = colDef(
align = 'left',
minWidth = 250,
cell = reactablefmtr::data_bars(
data = x,
fill_color = '#5a7ca3',
background = '#FFFFFF',
bar_height = 5,
number_fmt = scales::comma,
text_position = 'outside-end',
max_value = max(x$`Added colonies`),
icon_size = 15,
text_color = '#000',
round_edges = TRUE
)
)
)
)
}else{
x |>
reactable(
defaultColDef = colDef(
headerStyle = list(background = "#364559", color = "#fff"),
format = colFormat(digits = 0, separators = TRUE )
),
highlight = T,
columns = list(
Year = colDef(format = colFormat(separators = F)),
`Losted colonies (%)` = colDef(
align = 'left',
minWidth = 250,
cell =
reactablefmtr::data_bars(
data = x,
fill_color = '#EEEEEE',
number_fmt = scales::percent,
text_position = 'outside-end',
max_value = max(x$`Losted colonies (%)`+.03),
min_value = min(x$`Losted colonies (%)`-.03),
icon = 'circle',
icon_color = '#a35a5d',
icon_size = 15,
text_color = '#a35a5d',
round_edges = TRUE
)
),
`Renovated colonies (%)` = colDef(
align = 'left',
minWidth = 250,
cell =
reactablefmtr::data_bars(
data = x,
fill_color = '#EEEEEE',
number_fmt = scales::percent,
text_position = 'outside-end',
max_value = max(x$`Renovated colonies (%)`+.03),
min_value = min(x$`Renovated colonies (%)`-.03),
icon = 'circle',
icon_color = '#a35a5d',
icon_size = 15,
text_color = '#a35a5d',
round_edges = TRUE
)
),
`Mean colonies` = colDef(
align = 'left',
minWidth = 250,
cell = reactablefmtr::data_bars(
data = x,
fill_color = '#5a7ca3',
background = '#FFFFFF',
bar_height = 5,
number_fmt = scales::comma,
text_position = 'outside-end',
max_value = max(x$`Mean colonies`),
icon_size = 15,
text_color = '#000',
round_edges = TRUE
)
),
`Added colonies` = colDef(
align = 'left',
minWidth = 250,
cell = reactablefmtr::data_bars(
data = x,
fill_color = '#5a7ca3',
background = '#FFFFFF',
bar_height = 5,
number_fmt = scales::comma,
text_position = 'outside-end',
max_value = max(x$`Added colonies`),
icon_size = 15,
text_color = '#000',
round_edges = TRUE
)
)
)
)
}
})
output$grafico1 <- renderEcharts4r({
bees |>
filter(
state %in% input$var &
months %in% input$period &
year %in% input$year
) |>
group_by(months) |>
summarise(
`Colony means` = mean(colony_n, na.rm = T)
) |>
e_charts(months, dispose = FALSE) |>
e_bar(
`Colony means`
) |>
e_theme("auritus") |>
e_tooltip(trigger = "axis",textStyle = list(fontFamily = "Roboto Condensed", fontSize = 12)) |>
e_title(
"Number of colonies by months",
left = "center",
textStyle = list(
color = "gray",
fontFamily = "Roboto Condensed",
fontSize = 12
)
) |>
e_color(color = "#fcba03") |>
e_legend(right = 1,bottom = 1, orient = "vertical",textStyle = list(fontFamily = "Roboto Condensed",
color = "gray",
fontSize = 12))
})
output$grafico2 <- renderEcharts4r({
stressor |>
filter(
state %in% input$var &
months %in% input$period &
year %in% input$year &
stressor %in% input$stress
) |>
group_by(
stressor
) |>
summarise(
`Stressor efectivity (%)` = round(mean(stress_pct, na.rm = T))
) |>
arrange(desc(`Stressor efectivity (%)` )) |>
e_charts(stressor, dispose = FALSE) |>
e_bar(
`Stressor efectivity (%)`
) |>
e_theme("auritus") |>
e_tooltip(trigger = "axis",textStyle = list(fontFamily = "Roboto Condensed", fontSize = 12)) |>
e_title(
"Principal stressors for bees",
left = "center",
textStyle = list(
color = "gray",
fontFamily = "Roboto Condensed",
fontSize = 12
)
) |>
e_color(color = "#ad5b53") |>
e_legend(right = 1,bottom = 1, orient = "vertical",textStyle = list(fontFamily = "Roboto Condensed",
color = "gray",
fontSize = 12))
})
}