Drop TableOperations.jl

JuliaML · Apr 14, 2022 · 1cdf62f · 1cdf62f · juliohm · Apr 14, 2022
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commit 1cdf62f
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Showing 3 changed files with 6 additions and 9 deletions.
diff --git a/Project.toml b/Project.toml
@@ -1,7 +1,7 @@
 name = "TableDistances"
 uuid = "e5d66e97-8c70-46bb-8b66-04a2d73ad782"
 authors = ["Júlio Hoffimann <julio.hoffimann@gmail.com>", "José Augusto <jose.augusto@impa.br>"]
-version = "0.1.4"
+version = "0.2.0"
 
 [deps]
 CategoricalArrays = "324d7699-5711-5eae-9e2f-1d82baa6b597"
@@ -10,16 +10,14 @@ Distances = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7"
 ScientificTypes = "321657f4-b219-11e9-178b-2701a2544e81"
 Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 StringDistances = "88034a9c-02f8-509d-84a9-84ec65e18404"
-TableOperations = "ab02a1b2-a7df-11e8-156e-fb1833f50b87"
 Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c"
 
 [compat]
 CategoricalArrays = "0.10"
-CoDa = "0.7, 0.8, 0.9"
+CoDa = "0.10"
 Distances = "0.10"
 ScientificTypes = "2.3, 3.0"
 StringDistances = "0.11"
-TableOperations = "1.1"
 Tables = "1.5"
 julia = "1.6"
 

diff --git a/src/TableDistances.jl b/src/TableDistances.jl
@@ -6,7 +6,6 @@ module TableDistances
 
 # basic imports
 using Tables
-using TableOperations
 using ScientificTypes
 using Distances
 using Statistics

diff --git a/src/normalizations.jl b/src/normalizations.jl
@@ -11,10 +11,10 @@ default_normalization(::Type{<:Compositional}) =
 default_normalization(::Type) = nothing
 
 function normalize(tables...)
-  partitions = Tables.partitioner(collect(tables))
-  longtable  = TableOperations.joinpartitions(partitions)
-  colnames   = Tables.columnnames(longtable)
-  scitypes   = schema(longtable).scitypes
+  rtables   = Tables.rowtable.(tables)
+  longtable = Tables.columntable(reduce(vcat, rtables))
+  colnames  = Tables.columnnames(longtable)
+  scitypes  = schema(longtable).scitypes
 
   constants  = map(zip(colnames, scitypes)) do (c, s)
     x = Tables.getcolumn(longtable, c)