Plotting published expression data (in FPKM) for different slices of Drosophila Melanogaster embryos.
Shiny_app.R: the shiny app, which plots one gene at a time from a drop-down list
plot_slices.r: Rscript to plot genes from a list in different panels (here I plot the hox genes, output plot in hox_genes.pdf)
Reference:
Combs PA, Eisen MB (2013) Sequencing mRNA from Cryo-Sliced Drosophila Embryos to Determine Genome-Wide Spatial Patterns of Gene Expression. PLoS ONE 8(8): e71820. https://doi.org/10.1371/journal.pone.0071820