Keyword-Extraction-for-Pathology-Reports-with-BERT

This is Keyword extraction for pathology report based on the pre-trained BERT.
Please visit the original repo of BERT (Devlin, et al.) for more information about the pre-trained BERT.

For NOT programmer users

KEP is a web-based keyword extraction tool for pathology report.
Users who are not familiar with python can use this tool.

Environments

python 3.6  
pytorch 1.2.0  
pytorch-pretrained-bert 0.6.2  

Usage

Example:

python Keyword_Extraction_BERT.py --data sample.csv

Arguments:

--data			Data  
--maxlen		Max Length  
--bs			Batch Size  
--lr			Learning Rate  
--epoch			Epochs