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4 changes: 4 additions & 0 deletions
4
PuMA comparison files /alignments PuMA vs PaVE/AB331650_E10.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,4 @@ | ||
| >AB331650_E10_PaVE | ||
| ATGTCCATGCGTCTAATCTATTTCTTATTGCTGTTGTGGTGTGGGTTCAACTTTTTGTCTTTGTTGTTTGCAGTTGTGATTTATTTGCTTTTATTATCTGCTATGGATAATCTTAATGGATGGGATTGA | ||
| >AB331650_E10_PuMA | ||
| atggatgggattgagggaatcgtactgatattattgattttggtgttttggttcgggtttacttttgttgcctctgtcctcattattgtgatatatgcctgtctaatatttgcaatagaaagtatgaatggatggaactga |
8 changes: 8 additions & 0 deletions
8
PuMA comparison files /alignments PuMA vs PaVE/AB331650_E10.muscle.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,8 @@ | ||
| >AB331650_E10_PaVE | ||
| ATGTCCATG-----------CGT-CTAATCTATTTCTTATTGCTGTTGTGGTGTGGGTTC | ||
| AACTTT-TTGTCTTTGTTGTTTGCAGTTGTGATTTATTTGCTTTTATTATCTGCTATGGA | ||
| TAATCTTAATGGATGGGATTGA | ||
| >AB331650_E10_PuMA | ||
| ATGGATGGGATTGAGGGAATCGTACTGATATTATTGATTTTGGTGTTTTGGTTCGGGTTT | ||
| ACTTTTGTTGCCTCTGTC-CTCATTATTGTGATATATGCCTGTCTAATATTTGCAATAGA | ||
| AAGTATGAATGGATGGAACTGA |
4 changes: 4 additions & 0 deletions
4
PuMA comparison files /alignments PuMA vs PaVE/EF558842_E2.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,4 @@ | ||
| >EF558842_E2_PaVE | ||
| ATGACGGAGAGCCTTGCAGACCGTTTAAATGTGTGCCAGGAGAAAATACTGTCACTATATGAAGCTGACAGCAATGACTTAAATGCACAAATTGAGCACTGGAGACATGTGCGGCTGGAAAGTGTGTTGTTATATAAAGCGCGGGACTTGGGCATGCACCACGTTAACCACCAGGTGGTGCCAGTGCTTGCAGTGTCAAAGGCCAAAGCCCACGCAGCAATTGAGATGCAAATGGCGTTAGAAAGTTTAAACAAGTCGTCATTTAGCACGGAGCCTTGGACACTGGGAGATACCAGTCTGGAACGGTGGCACGCAGAACCCAGGGGATGCTTTAAAAAACAAGGGGTGGAGGTGGAAGTGAGATTTGATTGTGAAAAGGAAAATGCAATGCTGTACACATTGTGGACACACATATATGTGCATGGGGACGGAGGGTGGACTAGGGTATGTGGCAAAGTGGACTATTGTGGTATATATTATACCTGTGATGGTTTAAAAACATATTATGTGGAGTTTGCGGGGGATGCAAAAAAATATGGGAAGAAAGACATGTGGGAGGTGCATGTTGGTGGGAAGGTAATACATTCTCCCGGCTCTGTGTCTAGCTCTACCAGTGGCTACACGGTACCCACTGTTGAAACTGCTGCAAGACTGCACACCCCCCAAGTCCCAACGCCGACGTTGGGGGACCGGAGACCAGCAGCAGCACCACCAGCCAAACGAGCAAGAGTTGCAGACTCCACAGACTCCCCTGCAGTGCGGGCCTTGGACCATAACAGCAACGCACTGCTCTCTGGAGGTGTCGGCCCAGACTCCAGAGGGAGTTGTTATCACGGTGAAACTGCGCCTATAGTGCATTTAAAAGGTGATGCCAACGGGTTAAAGTGCCTTAGATACAGACTGAGTTCCAAGTACAAGCACTTGTATAAATACATTTCATCCACATGGCATTGGACAGACAGTGACTGCAAAAAAGCAATAGTAACTGTAACATACAGCAGTGAAACCCAACGCCAACAATTTTTAAGTACTGTAAAAATACCCCCCACGGTGTCCATTTCACAAGGGGTTATGTCATTGTAA | ||
| >EF558842_E2_PuMA | ||
| atgaaacagacaatgacggagagccttgcagaccgtttaaatgtgtgccaggagaaaatactgtcactatatgaagctgacagcaatgacttaaatgcacaaattgagcactggagacatgtgcggctggaaagtgtgttgttatataaagcgcgggacttgggcatgcaccacgttaaccaccaggtggtgccagtgcttgcagtgtcaaaggccaaagcccacgcagcaattgagatgcaaatggcgttagaaagtttaaacaagtcgtcatttagcacggagccttggacactgggagataccagtctggaacggtggcacgcagaacccaggggatgctttaaaaaacaaggggtggaggtggaagtgagatttgattgtgaaaaggaaaatgcaatgctgtacacattgtggacacacatatatgtgcatggggacggagggtggactagggtatgtggcaaagtggactattgtggtatatattatacctgtgatggtttaaaaacatattatgtggagtttgcgggggatgcaaaaaaatatgggaagaaagacatgtgggaggtgcatgttggtgggaaggtaatacattctcccggctctgtgtctagctctaccagtggctacacggtacccactgttgaaactgctgcaagactgcacaccccccaagtcccaacgccgacgttgggggaccggagaccagcagcagcaccaccagccaaacgagcaagagttgcagactccacagactcccctgcagtgcgggccttggaccataacagcaacgcactgctctctggaggtgtcggcccagactccagagggagttgttatcacggtgaaactgcgcctatagtgcatttaaaaggtgatgccaacgggttaaagtgccttagatacagactgagttccaagtacaagcacttgtataaatacatttcatccacatggcattggacagacagtgactgcaaaaaagcaatagtaactgtaacatacagcagtgaaacccaacgccaacaatttttaagtactgtaaaaataccccccacggtgtccatttcacaaggggttatgtcattgtaa |
40 changes: 40 additions & 0 deletions
40
PuMA comparison files /alignments PuMA vs PaVE/EF558842_E2.muscle.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,40 @@ | ||
| >EF558842_E2_PaVE | ||
| ------------ATGACGGAGAGCCTTGCAGACCGTTTAAATGTGTGCCAGGAGAAAATA | ||
| CTGTCACTATATGAAGCTGACAGCAATGACTTAAATGCACAAATTGAGCACTGGAGACAT | ||
| GTGCGGCTGGAAAGTGTGTTGTTATATAAAGCGCGGGACTTGGGCATGCACCACGTTAAC | ||
| CACCAGGTGGTGCCAGTGCTTGCAGTGTCAAAGGCCAAAGCCCACGCAGCAATTGAGATG | ||
| CAAATGGCGTTAGAAAGTTTAAACAAGTCGTCATTTAGCACGGAGCCTTGGACACTGGGA | ||
| GATACCAGTCTGGAACGGTGGCACGCAGAACCCAGGGGATGCTTTAAAAAACAAGGGGTG | ||
| GAGGTGGAAGTGAGATTTGATTGTGAAAAGGAAAATGCAATGCTGTACACATTGTGGACA | ||
| CACATATATGTGCATGGGGACGGAGGGTGGACTAGGGTATGTGGCAAAGTGGACTATTGT | ||
| GGTATATATTATACCTGTGATGGTTTAAAAACATATTATGTGGAGTTTGCGGGGGATGCA | ||
| AAAAAATATGGGAAGAAAGACATGTGGGAGGTGCATGTTGGTGGGAAGGTAATACATTCT | ||
| CCCGGCTCTGTGTCTAGCTCTACCAGTGGCTACACGGTACCCACTGTTGAAACTGCTGCA | ||
| AGACTGCACACCCCCCAAGTCCCAACGCCGACGTTGGGGGACCGGAGACCAGCAGCAGCA | ||
| CCACCAGCCAAACGAGCAAGAGTTGCAGACTCCACAGACTCCCCTGCAGTGCGGGCCTTG | ||
| GACCATAACAGCAACGCACTGCTCTCTGGAGGTGTCGGCCCAGACTCCAGAGGGAGTTGT | ||
| TATCACGGTGAAACTGCGCCTATAGTGCATTTAAAAGGTGATGCCAACGGGTTAAAGTGC | ||
| CTTAGATACAGACTGAGTTCCAAGTACAAGCACTTGTATAAATACATTTCATCCACATGG | ||
| CATTGGACAGACAGTGACTGCAAAAAAGCAATAGTAACTGTAACATACAGCAGTGAAACC | ||
| CAACGCCAACAATTTTTAAGTACTGTAAAAATACCCCCCACGGTGTCCATTTCACAAGGG | ||
| GTTATGTCATTGTAA | ||
| >EF558842_E2_PuMA | ||
| ATGAAACAGACAATGACGGAGAGCCTTGCAGACCGTTTAAATGTGTGCCAGGAGAAAATA | ||
| CTGTCACTATATGAAGCTGACAGCAATGACTTAAATGCACAAATTGAGCACTGGAGACAT | ||
| GTGCGGCTGGAAAGTGTGTTGTTATATAAAGCGCGGGACTTGGGCATGCACCACGTTAAC | ||
| CACCAGGTGGTGCCAGTGCTTGCAGTGTCAAAGGCCAAAGCCCACGCAGCAATTGAGATG | ||
| CAAATGGCGTTAGAAAGTTTAAACAAGTCGTCATTTAGCACGGAGCCTTGGACACTGGGA | ||
| GATACCAGTCTGGAACGGTGGCACGCAGAACCCAGGGGATGCTTTAAAAAACAAGGGGTG | ||
| GAGGTGGAAGTGAGATTTGATTGTGAAAAGGAAAATGCAATGCTGTACACATTGTGGACA | ||
| CACATATATGTGCATGGGGACGGAGGGTGGACTAGGGTATGTGGCAAAGTGGACTATTGT | ||
| GGTATATATTATACCTGTGATGGTTTAAAAACATATTATGTGGAGTTTGCGGGGGATGCA | ||
| AAAAAATATGGGAAGAAAGACATGTGGGAGGTGCATGTTGGTGGGAAGGTAATACATTCT | ||
| CCCGGCTCTGTGTCTAGCTCTACCAGTGGCTACACGGTACCCACTGTTGAAACTGCTGCA | ||
| AGACTGCACACCCCCCAAGTCCCAACGCCGACGTTGGGGGACCGGAGACCAGCAGCAGCA | ||
| CCACCAGCCAAACGAGCAAGAGTTGCAGACTCCACAGACTCCCCTGCAGTGCGGGCCTTG | ||
| GACCATAACAGCAACGCACTGCTCTCTGGAGGTGTCGGCCCAGACTCCAGAGGGAGTTGT | ||
| TATCACGGTGAAACTGCGCCTATAGTGCATTTAAAAGGTGATGCCAACGGGTTAAAGTGC | ||
| CTTAGATACAGACTGAGTTCCAAGTACAAGCACTTGTATAAATACATTTCATCCACATGG | ||
| CATTGGACAGACAGTGACTGCAAAAAAGCAATAGTAACTGTAACATACAGCAGTGAAACC | ||
| CAACGCCAACAATTTTTAAGTACTGTAAAAATACCCCCCACGGTGTCCATTTCACAAGGG | ||
| GTTATGTCATTGTAA |
4 changes: 4 additions & 0 deletions
4
PuMA comparison files /alignments PuMA vs PaVE/EU493091_E2.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,4 @@ | ||
| >EU493091_E2_PaVE | ||
| ATGGATGCGAACCAGCGACTGATGGAAGTGCAGAACATTCAGTTGTCAATAATTGAGCAGGACAGCCACACATTAGGCTCAATTCTTGAGTTCTATAAGGCCATGAAAGTTGAATACTTGCTTCTCGCGGCCGCGCGTAAAAAAGGACGGTTGCACATAGGGGTGCAGCGCGTACCCCCAATGCAAGTGTCCGAAACAAAATACAGAGAAGCATCTACCATGATAGTGTTAATCGAGTCATTAATGCAATCGCAATTCAGGGACAGAAAGTTCTCATTGCATGAGCTTCAATATAGCCTTGTAATGACGCCGCCAGAATACACTGTTAAGCAGGGCCCAAAACAGGTGTATATTACGTACAGCGACCCAAGCCAAACCACAGAACAATTTACCAAATGGAAGACCATCCTGTATCAGACCGATGATTGGAGTGAACGCCCCTCGCTGCCAGGCACCCACGACCCCAAGTGGTTTCTCGCGCACACACTGACAGACAAAAACGGACTTTTCATTGTTGATAAATCCGGTGACAAAGACTATTATGCCTTTTTCAGTACCAAAGAGCCCAGCAGCGCAGTCGCCAGGGGACAGTGGACAATCTCATCCACCGTACCAGCAGCCGCCGCCTTATCCAGGCAGCCCTCGCCCCGCCGATCGAACTCCCCGAACCTCGACCCCTGCACACGCTCCAGGGGTTCCCACTGTGGAGGAGTCTCCCCCAGCAACCCCGACACCCCCGACACCGCCGGTGTCAGACCCCGAGACAGAACCGGCGGACTCGGGACACCCCCTAAGTCCGCCAGGGGTGGGGGAGGACGGGGACAGTCCACAGGAGGTTCCAAGCTCCAGCGGGGCCCCAGAGTCACCCCCAGGTCCTCAAGACAGTCTAAAGAAAAAAATCCAGTCTCTCCAGCAGAGGTTGGACAAAATAGAAAAACAGTGTCAGGACCTGGAACGAGACTTGACCGGCTAATTCGGGAAGCTCGTGACCCACCAGGCGTTATTATTGAAGGGTCAACTAGCCAAATCAAACATCTTAGGCGGCGCATTCAGTTAGGCCCATTGAAATATTTGCGTGTGACTTCGACATGGCATTGGATAGTGAACAAAAAGGTTCAGAAGCCCTGTAAGATGATTGTTGTTTTTAGCAATAACGCTGAAAGGCAGACGTTCCTGCATTTATTCAGGGTTGAGGGCGATGGGATATCAGTTAGGCTTTGCTCATTTAATGGCTTATAA | ||
| >EU493091_E2_PuMA | ||
| atgatggatgcgaaccagcgactgatggaagtgcagaacattcagttgtcaataattgagcaggacagccacacattaggctcaattcttgagttctataaggccatgaaagttgaatacttgcttctcgcggccgcgcgtaaaaaaggacggttgcacataggggtgcagcgcgtacccccaatgcaagtgtccgaaacaaaatacagagaagcatctaccatgatagtgttaatcgagtcattaatgcaatcgcaattcagggacagaaagttctcattgcatgagcttcaatatagccttgtaatgacgccgccagaatacactgttaagcagggcccaaaacaggtgtatattacgtacagcgacccaagccaaaccacagaacaatttaccaaatggaagaccatcctgtatcagaccgatgattggagtgaacgcccctcgctgccaggcacccacgaccccaagtggtttctcgcgcacacactgacagacaaaaacggacttttcattgttgataaatccggtgacaaagactattatgcctttttcagtaccaaagagcccagcagcgcagtcgccaggggacagtggacaatctcatccaccgtaccagcagccgccgccttatccaggcagccctcgccccgccgatcgaactccccgaacctcgacccctgcacacgctccaggggttcccactgtggaggagtctcccccagcaaccccgacacccccgacaccgccggtgtcagaccccgagacagaaccggcggactcgggacaccccctaagtccgccaggggtgggggaggacggggacagtccacaggaggttccaagctccagcggggccccagagtcacccccaggtcctcaagacagtctaaagaaaaaaatccagtctctccagcagaggttggacaaaatagaaaaacagtgtcaggacctggaacgagacttgaccggctaattcgggaagctcgtgacccaccaggcgttattattgaagggtcaactagccaaatcaaacatcttaggcggcgcattcagttaggcccattgaaatatttgcgtgtgacttcgacatggcattggatagtgaacaaaaaggttcagaagccctgtaagatgattgttgtttttagcaataacgctgaaaggcagacgttcctgcatttattcagggttgagggcgatgggatatcagttaggctttgctcatttaatggcttataa |
44 changes: 44 additions & 0 deletions
44
PuMA comparison files /alignments PuMA vs PaVE/EU493091_E2.muscle.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,44 @@ | ||
| >EU493091_E2_PaVE | ||
| ---ATGGATGCGAACCAGCGACTGATGGAAGTGCAGAACATTCAGTTGTCAATAATTGAG | ||
| CAGGACAGCCACACATTAGGCTCAATTCTTGAGTTCTATAAGGCCATGAAAGTTGAATAC | ||
| TTGCTTCTCGCGGCCGCGCGTAAAAAAGGACGGTTGCACATAGGGGTGCAGCGCGTACCC | ||
| CCAATGCAAGTGTCCGAAACAAAATACAGAGAAGCATCTACCATGATAGTGTTAATCGAG | ||
| TCATTAATGCAATCGCAATTCAGGGACAGAAAGTTCTCATTGCATGAGCTTCAATATAGC | ||
| CTTGTAATGACGCCGCCAGAATACACTGTTAAGCAGGGCCCAAAACAGGTGTATATTACG | ||
| TACAGCGACCCAAGCCAAACCACAGAACAATTTACCAAATGGAAGACCATCCTGTATCAG | ||
| ACCGATGATTGGAGTGAACGCCCCTCGCTGCCAGGCACCCACGACCCCAAGTGGTTTCTC | ||
| GCGCACACACTGACAGACAAAAACGGACTTTTCATTGTTGATAAATCCGGTGACAAAGAC | ||
| TATTATGCCTTTTTCAGTACCAAAGAGCCCAGCAGCGCAGTCGCCAGGGGACAGTGGACA | ||
| ATCTCATCCACCGTACCAGCAGCCGCCGCCTTATCCAGGCAGCCCTCGCCCCGCCGATCG | ||
| AACTCCCCGAACCTCGACCCCTGCACACGCTCCAGGGGTTCCCACTGTGGAGGAGTCTCC | ||
| CCCAGCAACCCCGACACCCCCGACACCGCCGGTGTCAGACCCCGAGACAGAACCGGCGGA | ||
| CTCGGGACACCCCCTAAGTCCGCCAGGGGTGGGGGAGGACGGGGACAGTCCACAGGAGGT | ||
| TCCAAGCTCCAGCGGGGCCCCAGAGTCACCCCCAGGTCCTCAAGACAGTCTAAAGAAAAA | ||
| AATCCAGTCTCTCCAGCAGAGGTTGGACAAAATAGAAAAACAGTGTCAGGACCTGGAACG | ||
| AGACTTGACCGGCTAATTCGGGAAGCTCGTGACCCACCAGGCGTTATTATTGAAGGGTCA | ||
| ACTAGCCAAATCAAACATCTTAGGCGGCGCATTCAGTTAGGCCCATTGAAATATTTGCGT | ||
| GTGACTTCGACATGGCATTGGATAGTGAACAAAAAGGTTCAGAAGCCCTGTAAGATGATT | ||
| GTTGTTTTTAGCAATAACGCTGAAAGGCAGACGTTCCTGCATTTATTCAGGGTTGAGGGC | ||
| GATGGGATATCAGTTAGGCTTTGCTCATTTAATGGCTTATAA | ||
| >EU493091_E2_PuMA | ||
| ATGATGGATGCGAACCAGCGACTGATGGAAGTGCAGAACATTCAGTTGTCAATAATTGAG | ||
| CAGGACAGCCACACATTAGGCTCAATTCTTGAGTTCTATAAGGCCATGAAAGTTGAATAC | ||
| TTGCTTCTCGCGGCCGCGCGTAAAAAAGGACGGTTGCACATAGGGGTGCAGCGCGTACCC | ||
| CCAATGCAAGTGTCCGAAACAAAATACAGAGAAGCATCTACCATGATAGTGTTAATCGAG | ||
| TCATTAATGCAATCGCAATTCAGGGACAGAAAGTTCTCATTGCATGAGCTTCAATATAGC | ||
| CTTGTAATGACGCCGCCAGAATACACTGTTAAGCAGGGCCCAAAACAGGTGTATATTACG | ||
| TACAGCGACCCAAGCCAAACCACAGAACAATTTACCAAATGGAAGACCATCCTGTATCAG | ||
| ACCGATGATTGGAGTGAACGCCCCTCGCTGCCAGGCACCCACGACCCCAAGTGGTTTCTC | ||
| GCGCACACACTGACAGACAAAAACGGACTTTTCATTGTTGATAAATCCGGTGACAAAGAC | ||
| TATTATGCCTTTTTCAGTACCAAAGAGCCCAGCAGCGCAGTCGCCAGGGGACAGTGGACA | ||
| ATCTCATCCACCGTACCAGCAGCCGCCGCCTTATCCAGGCAGCCCTCGCCCCGCCGATCG | ||
| AACTCCCCGAACCTCGACCCCTGCACACGCTCCAGGGGTTCCCACTGTGGAGGAGTCTCC | ||
| CCCAGCAACCCCGACACCCCCGACACCGCCGGTGTCAGACCCCGAGACAGAACCGGCGGA | ||
| CTCGGGACACCCCCTAAGTCCGCCAGGGGTGGGGGAGGACGGGGACAGTCCACAGGAGGT | ||
| TCCAAGCTCCAGCGGGGCCCCAGAGTCACCCCCAGGTCCTCAAGACAGTCTAAAGAAAAA | ||
| AATCCAGTCTCTCCAGCAGAGGTTGGACAAAATAGAAAAACAGTGTCAGGACCTGGAACG | ||
| AGACTTGACCGGCTAATTCGGGAAGCTCGTGACCCACCAGGCGTTATTATTGAAGGGTCA | ||
| ACTAGCCAAATCAAACATCTTAGGCGGCGCATTCAGTTAGGCCCATTGAAATATTTGCGT | ||
| GTGACTTCGACATGGCATTGGATAGTGAACAAAAAGGTTCAGAAGCCCTGTAAGATGATT | ||
| GTTGTTTTTAGCAATAACGCTGAAAGGCAGACGTTCCTGCATTTATTCAGGGTTGAGGGC | ||
| GATGGGATATCAGTTAGGCTTTGCTCATTTAATGGCTTATAA |
4 changes: 4 additions & 0 deletions
4
PuMA comparison files /alignments PuMA vs PaVE/FM955839_E6.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,4 @@ | ||
| >FM955839_E6_PaVE | ||
| ATGGAGCCACGACCACTGACCGTACAACATCTCAGTGATAAACTCACTGTACCAATAGAAGATTTATTAGTGCCTTGCAGATTTTGCAACCGGTTTCTAACCTATTTAGAGTTGAGACAATTTGACTATAAATTTCTTCACTTAATTTGGACTGAAGAAGATTTTGTATTTGCTTGCTGTGGTGGTTGTGCATTTGCATCTGCACAATTTGAGTATCAACAATATTACCAAGGAACTGTTTATGGTAGAGATATAGAGCAGTTGGAGCAAAAACCTATAGGTGAAATTCCTATTCGCTGCCAATACTGCTTAAAGTTTCTTGATTTGACAGAAAAATTGGATATCTGTTGCTTAAATCAGGCATTTCACAAGGTTAGAAACCATTGGAAGGGAAGGTGCAGGCATTGTAAGGCAATAGAATGA | ||
| >FM955839_E6_PuMA | ||
| atgtatttaagaaggatgtgctgtgctaaggtattcatggagccacgaccactgaccgtacaacatctcagtgataaactcactgtaccaatagaagatttattagtgccttgcagattttgcaaccggtttctaacctatttagagttgagacaatttgactataaatttcttcacttaatttggactgaagaagattttgtatttgcttgctgtggtggttgtgcatttgcatctgcacaatttgagtatcaacaatattaccaaggaactgtttatggtagagatatagagcagttggagcaaaaacctataggtgaaattcctattcgctgccaatactgcttaaagtttcttgatttgacagaaaaattggatatctgttgcttaaatcaggcatttcacaaggttagaaaccattggaagggaaggtgcaggcattgtaaggcaatagaatga |
18 changes: 18 additions & 0 deletions
18
PuMA comparison files /alignments PuMA vs PaVE/FM955839_E6.muscle.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| >FM955839_E6_PaVE | ||
| ------------------------------------ATGGAGCCACGACCACTGACCGTA | ||
| CAACATCTCAGTGATAAACTCACTGTACCAATAGAAGATTTATTAGTGCCTTGCAGATTT | ||
| TGCAACCGGTTTCTAACCTATTTAGAGTTGAGACAATTTGACTATAAATTTCTTCACTTA | ||
| ATTTGGACTGAAGAAGATTTTGTATTTGCTTGCTGTGGTGGTTGTGCATTTGCATCTGCA | ||
| CAATTTGAGTATCAACAATATTACCAAGGAACTGTTTATGGTAGAGATATAGAGCAGTTG | ||
| GAGCAAAAACCTATAGGTGAAATTCCTATTCGCTGCCAATACTGCTTAAAGTTTCTTGAT | ||
| TTGACAGAAAAATTGGATATCTGTTGCTTAAATCAGGCATTTCACAAGGTTAGAAACCAT | ||
| TGGAAGGGAAGGTGCAGGCATTGTAAGGCAATAGAATGA | ||
| >FM955839_E6_PuMA | ||
| ATGTATTTAAGAAGGATGTGCTGTGCTAAGGTATTCATGGAGCCACGACCACTGACCGTA | ||
| CAACATCTCAGTGATAAACTCACTGTACCAATAGAAGATTTATTAGTGCCTTGCAGATTT | ||
| TGCAACCGGTTTCTAACCTATTTAGAGTTGAGACAATTTGACTATAAATTTCTTCACTTA | ||
| ATTTGGACTGAAGAAGATTTTGTATTTGCTTGCTGTGGTGGTTGTGCATTTGCATCTGCA | ||
| CAATTTGAGTATCAACAATATTACCAAGGAACTGTTTATGGTAGAGATATAGAGCAGTTG | ||
| GAGCAAAAACCTATAGGTGAAATTCCTATTCGCTGCCAATACTGCTTAAAGTTTCTTGAT | ||
| TTGACAGAAAAATTGGATATCTGTTGCTTAAATCAGGCATTTCACAAGGTTAGAAACCAT | ||
| TGGAAGGGAAGGTGCAGGCATTGTAAGGCAATAGAATGA |
4 changes: 4 additions & 0 deletions
4
PuMA comparison files /alignments PuMA vs PaVE/GQ180114_E2.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,4 @@ | ||
| >GQ180114_E2_PaVE | ||
| ATGAACTCACTGGAGGCACGTTTCGATGCTGTGCAAGACCAAATTCTCAGTCTGTATGAGAAAGGCAGTACTGATCTTGCAGACCAAATACTGTACTGGTCACTAGTGAGGAAGGAGGGTGCACTGGAAGTGGTTGCCAGGAGGCAAGGCCTCAATAGACTTGGACTACATACTGTACCCTCCCAGGTGGGTGCAGAGCATAAAGCTAAGTCAGCCATATTAATGCACCTGCAGTTAACCTCACTTAAAAACTCCAAATATGGAGGTGAGCCTTGGACAATGCCTGAAACGAGCATTGAAATGTATGAAAGGACTGAACCTAGTGGGACGTTTAAAAAACACGGACATGAGGCTGAAGTGCTATATGACTGTAATGAAGAAAATGCTGTGTCATACATGGTCTGGGGAGCTATCTATAAGCAAGAAGAAGATGGGGTCTGGCAAAAGTATAGTAGTGATGTGGACTACTATGGGGTATACTATACTGATCGCCATGGTAACCGTGTTTATTATGAGGACTTTGATAAGGATTCTGATCGTTTTGGTAGACTCAAACAATGGACAGTGAACTTTAAGACCTCAACCTTTACATCTTGCCCCGATAGCTCAACCAAAGAAACCTGTACCAGCACCCCGACCCACTCCAAAAGGCGGCGAGACTACGACACCACCGACACCGGACCCACGAAGAAAGCTCTTCGGCGAACCCCCTCGCCGACCACGCCGATCAAGGTTGGGATCGGAAGGAGACAGCGACAAGGAGAACCAAGATCCGGACGAGGAACCCACACCGAACACACCGAACAAGTTGGGGTCAGTCCTGAAGAGGTTGGAAGAGGACTTCAGGGACCTCCTCGACACTGTGGAGGACGCCTCCAAAATCTTCACGCTGATGCTCGGGACCCGCCCATAATTCTTGTCAAAGGTCCGCCAAATTCACTAAAATGTTGGAGGAATCGGGTTAGACGGCGCTTTCCAAGGCCATTTTCTCAAATCAGTACTGTGTTTACGTGGGTTGATGAAAGGGACTCTGTTGGTGCTACTTCTGCTCAGTTGTTAGTTGCTTTCACTGATGATCATCAAAGGACTGTGTTTCTTGAGACTGTAACTGTTCCTAAGGGTGCTTTGGTGTATAAGGGTTCTCTAGACGGTCTGTAA | ||
| >GQ180114_E2_PuMA | ||
| atgaactcactggaggcacgtttcgatgctgtgcaagaccaaattctcagtctgtatgagaaaggcagtactgatcttgcagaccaaatactgtactggtcactagtgaggaaggagggtgcactggaagtggttgccaggaggcaaggcctcaatagacttggactacatactgtaccctcccaggtgggtgcagagcataaagctaagtcagccatattaatgcacctgcagttaacctcacttaaaaactccaaatatggaggtgagccttggacaatgcctgaaacgagcattgaaatgtatgaaaggactgaacctagtgggacgtttaaaaaacacggacatgaggctgaagtgctatatgactgtaatgaagaaaatgctgtgtcatacatggtctggggagctatctataagcaagaagaagatggggtctggcaaaagtatagtagtgatgtggactactatggggtatactatactgatcgccatggtaaccgtgtttattatgaggactttgataaggattctgatcgttttggtagactcaaacaatggacagtgaactttaagacctcaacctttacatcttgccccgatagctcaaccaaagaaacctgtaccagcaccccgacccactccaaaaggcggcgagactacgacaccaccgacaccggacccacgaagaaagctcttcggcgaaccccctcgccgaccacgccgatcaaggttgggatcggaaggagacagcgacaaggagaaccaagatccggacgaggaacccacaccgaacacaccgaacaagttggggtcagtcctgaagaggttggaagaggacttcagggacctcctcgacactgtggaggacgcctccaaaatcttcacgctgatgctcgggacccgcccataattcttgtcaaaggtccgccaaattcactaaaatgttggaggaatcgggttagacggcgctttccaaggccattttctcaaatcagtactgtgtttacgtgggttgatgaaagggactctgttggtgctacttctgctcagttgttagttgctttcactgatgatcatcaaaggactgtgtttcttgagactgtaactgttcctaagggtgctttggtgtataagggttctctagacggtctgtaa |
42 changes: 42 additions & 0 deletions
42
PuMA comparison files /alignments PuMA vs PaVE/GQ180114_E2.muscle.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,42 @@ | ||
| >GQ180114_E2_PaVE | ||
| ATGAACTCACTGGAGGCACGTTTCGATGCTGTGCAAGACCAAATTCTCAGTCTGTATGAG | ||
| AAAGGCAGTACTGATCTTGCAGACCAAATACTGTACTGGTCACTAGTGAGGAAGGAGGGT | ||
| GCACTGGAAGTGGTTGCCAGGAGGCAAGGCCTCAATAGACTTGGACTACATACTGTACCC | ||
| TCCCAGGTGGGTGCAGAGCATAAAGCTAAGTCAGCCATATTAATGCACCTGCAGTTAACC | ||
| TCACTTAAAAACTCCAAATATGGAGGTGAGCCTTGGACAATGCCTGAAACGAGCATTGAA | ||
| ATGTATGAAAGGACTGAACCTAGTGGGACGTTTAAAAAACACGGACATGAGGCTGAAGTG | ||
| CTATATGACTGTAATGAAGAAAATGCTGTGTCATACATGGTCTGGGGAGCTATCTATAAG | ||
| CAAGAAGAAGATGGGGTCTGGCAAAAGTATAGTAGTGATGTGGACTACTATGGGGTATAC | ||
| TATACTGATCGCCATGGTAACCGTGTTTATTATGAGGACTTTGATAAGGATTCTGATCGT | ||
| TTTGGTAGACTCAAACAATGGACAGTGAACTTTAAGACCTCAACCTTTACATCTTGCCCC | ||
| GATAGCTCAACCAAAGAAACCTGTACCAGCACCCCGACCCACTCCAAAAGGCGGCGAGAC | ||
| TACGACACCACCGACACCGGACCCACGAAGAAAGCTCTTCGGCGAACCCCCTCGCCGACC | ||
| ACGCCGATCAAGGTTGGGATCGGAAGGAGACAGCGACAAGGAGAACCAAGATCCGGACGA | ||
| GGAACCCACACCGAACACACCGAACAAGTTGGGGTCAGTCCTGAAGAGGTTGGAAGAGGA | ||
| CTTCAGGGACCTCCTCGACACTGTGGAGGACGCCTCCAAAATCTTCACGCTGATGCTCGG | ||
| GACCCGCCCATAATTCTTGTCAAAGGTCCGCCAAATTCACTAAAATGTTGGAGGAATCGG | ||
| GTTAGACGGCGCTTTCCAAGGCCATTTTCTCAAATCAGTACTGTGTTTACGTGGGTTGAT | ||
| GAAAGGGACTCTGTTGGTGCTACTTCTGCTCAGTTGTTAGTTGCTTTCACTGATGATCAT | ||
| CAAAGGACTGTGTTTCTTGAGACTGTAACTGTTCCTAAGGGTGCTTTGGTGTATAAGGGT | ||
| TCTCTAGACGGTCTGTAA | ||
| >GQ180114_E2_PuMA | ||
| ATGAACTCACTGGAGGCACGTTTCGATGCTGTGCAAGACCAAATTCTCAGTCTGTATGAG | ||
| AAAGGCAGTACTGATCTTGCAGACCAAATACTGTACTGGTCACTAGTGAGGAAGGAGGGT | ||
| GCACTGGAAGTGGTTGCCAGGAGGCAAGGCCTCAATAGACTTGGACTACATACTGTACCC | ||
| TCCCAGGTGGGTGCAGAGCATAAAGCTAAGTCAGCCATATTAATGCACCTGCAGTTAACC | ||
| TCACTTAAAAACTCCAAATATGGAGGTGAGCCTTGGACAATGCCTGAAACGAGCATTGAA | ||
| ATGTATGAAAGGACTGAACCTAGTGGGACGTTTAAAAAACACGGACATGAGGCTGAAGTG | ||
| CTATATGACTGTAATGAAGAAAATGCTGTGTCATACATGGTCTGGGGAGCTATCTATAAG | ||
| CAAGAAGAAGATGGGGTCTGGCAAAAGTATAGTAGTGATGTGGACTACTATGGGGTATAC | ||
| TATACTGATCGCCATGGTAACCGTGTTTATTATGAGGACTTTGATAAGGATTCTGATCGT | ||
| TTTGGTAGACTCAAACAATGGACAGTGAACTTTAAGACCTCAACCTTTACATCTTGCCCC | ||
| GATAGCTCAACCAAAGAAACCTGTACCAGCACCCCGACCCACTCCAAAAGGCGGCGAGAC | ||
| TACGACACCACCGACACCGGACCCACGAAGAAAGCTCTTCGGCGAACCCCCTCGCCGACC | ||
| ACGCCGATCAAGGTTGGGATCGGAAGGAGACAGCGACAAGGAGAACCAAGATCCGGACGA | ||
| GGAACCCACACCGAACACACCGAACAAGTTGGGGTCAGTCCTGAAGAGGTTGGAAGAGGA | ||
| CTTCAGGGACCTCCTCGACACTGTGGAGGACGCCTCCAAAATCTTCACGCTGATGCTCGG | ||
| GACCCGCCCATAATTCTTGTCAAAGGTCCGCCAAATTCACTAAAATGTTGGAGGAATCGG | ||
| GTTAGACGGCGCTTTCCAAGGCCATTTTCTCAAATCAGTACTGTGTTTACGTGGGTTGAT | ||
| GAAAGGGACTCTGTTGGTGCTACTTCTGCTCAGTTGTTAGTTGCTTTCACTGATGATCAT | ||
| CAAAGGACTGTGTTTCTTGAGACTGTAACTGTTCCTAAGGGTGCTTTGGTGTATAAGGGT | ||
| TCTCTAGACGGTCTGTAA |
4 changes: 4 additions & 0 deletions
4
PuMA comparison files /alignments PuMA vs PaVE/GU117621_E2.fas
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,4 @@ | ||
| >GU117621_E2_PaVE | ||
| ATGGAGACCCTAGAGAGGTTTTGCAACCTCTTAGATGTACTGCAAGAAGGGCAGATGGACTGTCTTGAACAGGATGATGGAGATATAAACAATGTAGAAAAATATCTCAGCTTTGTTAGAAAGGAAGCAATGCTACTGTGTGCTGCCCATGCAAAGGGGATTAAAAGGTTGGGTATGACACCTGTGCCACCCAAAGCTGTTTGTGAGGGGAATGCAAAGGATGCAATAGAGCTGCATCTGCTTGCTACCTCTTTAAAAAACAGTTGCTATGCCTCTGAACGATGGACCCTCACAGATGTATCTAAGGAGATGTATGCTTCCCCTCCGTGCTGGACATTTAAAAAAGGGGGGCGCACTGTGAGAGTTACATTTGGTGAGGGATCGGGCAATTGTATGGACTATGTGTGTTGGACTCATGTATATCATCAATCAGAGGATGGGGTGTGGGGCTGCACCTCATCCCATGTGGACTGTCATGGTATCTATGCCTGCATGGATGGCTTTAAGAACTATTACATAGACTTTACAAAGGAGGCGGTTAAGTATGGTGCCAGTCCTGACTGCAAGATTGTCTGGGAGGGTTCAGGCCTAACACCTTCTGCACTTGTGTCTAGCACCTCGAGCTGTGACCTCACCTCTGTATCAACTACTGGAGGAGACTCGGAGGACTCGACAGAGGACTTCAGAAGGCCACCCAAAAAGCGGGCAAGGTCCTATGTCTGCAGGGATCCTCTCACAGACACAGACTCAGGACCAGAGCCCGACTCCCCAGCACCATCCGCACATCCTGTGCACTCCACCCCGCTCACCCACGAGCAGCGGGAGCGCAGCGACGGAACTGACATCCCCACCACCGGTGTCTGTGAGCCTGACCGTGGGAGTTCCAGGGGCTCCGGAGATTACCCTCTCATTCCTGCTCTCCTAATCTCAGGTGGGGGAAACCAGGTCAAATGTCTTCGCTGGCGCCTAAAGAGGCACCATAAACGTGACTATAGGAACTGTTCCACAACATGGACCTGGGTTTCAAATGTTGATGGACTGTCGAGGGAGCCTGGACACCGCATCTTTGTGTCCTTCTATTCAGAGCAACAGCGCCAAACGTTCCTAGACAGGACCCCACTCCCACAAGGAGTTAAGACTGCATTCTGTGAACTGCCTTTCTAA | ||
| >GU117621_E2_PuMA | ||
| atggactgtcttgaacaggatgatggagatataaacaatgtagaaaaatatctcagctttgttagaaaggaagcaatgctactgtgtgctgcccatgcaaaggggattaaaaggttgggtatgacacctgtgccacccaaagctgtttgtgaggggaatgcaaaggatgcaatagagctgcatctgcttgctacctctttaaaaaacagttgctatgcctctgaacgatggaccctcacagatgtatctaaggagatgtatgcttcccctccgtgctggacatttaaaaaaggggggcgcactgtgagagttacatttggtgagggatcgggcaattgtatggactatgtgtgttggactcatgtatatcatcaatcagaggatggggtgtggggctgcacctcatcccatgtggactgtcatggtatctatgcctgcatggatggctttaagaactattacatagactttacaaaggaggcggttaagtatggtgccagtcctgactgcaagattgtctgggagggttcaggcctaacaccttctgcacttgtgtctagcacctcgagctgtgacctcacctctgtatcaactactggaggagactcggaggactcgacagaggacttcagaaggccacccaaaaagcgggcaaggtcctatgtctgcagggatcctctcacagacacagactcaggaccagagcccgactccccagcaccatccgcacatcctgtgcactccaccccgctcacccacgagcagcgggagcgcagcgacggaactgacatccccaccaccggtgtctgtgagcctgaccgtgggagttccaggggctccggagattaccctctcattcctgctctcctaatctcaggtgggggaaaccaggtcaaatgtcttcgctggcgcctaaagaggcaccataaacgtgactataggaactgttccacaacatggacctgggtttcaaatgttgatggactgtcgagggagcctggacaccgcatctttgtgtccttctattcagagcaacagcgccaaacgttcctagacaggaccccactcccacaaggagttaagactgcattctgtgaactgcctttctaa |
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