By: Laurynas Kalesinskas
The method is described in LINK. It was originally developed for gene expression data, but can be adapted for any type of high dimensional meta-analysis.
To install bayesMetaIntegrator, first you must install the JAGs executable for your system. This can be found here.
Following JAGS installation, the bayesMetaIntegrator package can be installed and loaded using devtools:
install.packages("devtools")
If devtools are already installed, or after devtools installation please run:
devtools::install_github('khatrilab/bayesMetaIntegrator', build = TRUE)
To get full use of bayesMetaIntegrator, it is recommended you install MetaIntegrator as well. This package can be found on CRAN.
A vignette with a demo data is included in the package. To open the vignette from R please use:
vignette(package = "bayesMetaintegrator", topic = "Example_MetaAnalysis")