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Fix duplicate filenames in manifest while merging or rebasing #4
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- `create_file_list` now uses `uniq` on file list - `create_file_list` is no longer private - Fix `stub_file_open_for_write` assertion to prevent errors on failing test
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create_file_listnow usesuniqon file listcreate_file_listis no longer privatestub_file_open_for_writeassertion to prevent errors on failingtest