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Morphological Contour Interpolation

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An ITK-based implementation of morphological contour interpolation based off the paper:

Albu AB1, Beugeling T, Laurendeau D. "A morphology-based approach for interslice interpolation of anatomical slices from volumetric images." IEEE Trans Biomed Eng. 2008 Aug;55(8):2022-38. doi: 10.1109/TBME.2008.921158.

Documentation can be found in the Insight Journal article:

Zukić D., Vicory J., McCormick M., Wisse L., Gerig G., Yushkevich P., Aylward S.
"ND Morphological Contour Interpolation",
The Insight Journal,
January-December, 2016.
http://insight-journal.org/browse/publication/977
http://hdl.handle.net/10380/3563

To install the Python packages:

python -m pip install --upgrade pip
python -m pip install itk-morphologicalcontourinterpolation

Since ITK 4.11.0, this module is available in the ITK source tree as a Remote module. To enable it, set:

Module_MorphologicalContourInterpolation:BOOL=ON

in ITK's CMake build configuration.

Acknowledgements

This work is supported by NIH grant R01 EB014346, “Continued development and maintenance of the ITK-SNAP 3D image segmentation software."