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Update pyKVFinderResults docstring and documentation #62

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Update pyKVFinderResults docstring and documentation #62

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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 20be272c6735472cac00b60093c59d94
config: 80d08f2d83a4e2fa1777f29aeee6c2b0
tags: 645f666f9bcd5a90fca523b33c5a78b7
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Expand Down Expand Up @@ -416,10 +416,10 @@ <h1>pyKVFinder.pyKVFinderResults<a class="headerlink" href="#pykvfinder-pykvfind
and so on.</p>
</div>
<p class="rubric">Example</p>
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="kn">from</span> <span class="nn">pyKVFinder</span> <span class="kn">import</span> <span class="n">pyKVFinder</span>
<span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">os</span>
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">os</span>
<span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">pyKVFinder</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">pdb</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">dirname</span><span class="p">(</span><span class="n">pyKVFinder</span><span class="o">.</span><span class="vm">__file__</span><span class="p">),</span> <span class="s1">&#39;data&#39;</span><span class="p">,</span> <span class="s1">&#39;tests&#39;</span><span class="p">,</span> <span class="s1">&#39;1FMO.pdb&#39;</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span> <span class="o">=</span> <span class="n">pyKVFinder</span><span class="p">(</span><span class="n">pdb</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span> <span class="o">=</span> <span class="n">pyKVFinder</span><span class="o">.</span><span class="n">run_workflow</span><span class="p">(</span><span class="n">pdb</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span><span class="o">.</span><span class="n">export</span><span class="p">()</span>
</pre></div>
</div>
Expand Down Expand Up @@ -467,10 +467,10 @@ <h1>pyKVFinder.pyKVFinderResults<a class="headerlink" href="#pykvfinder-pykvfind
</ul>
</div>
<p class="rubric">Example</p>
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="kn">from</span> <span class="nn">pyKVFinder</span> <span class="kn">import</span> <span class="n">pyKVFinder</span>
<span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">os</span>
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">os</span>
<span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">pyKVFinder</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">pdb</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">dirname</span><span class="p">(</span><span class="n">pyKVFinder</span><span class="o">.</span><span class="vm">__file__</span><span class="p">),</span> <span class="s1">&#39;data&#39;</span><span class="p">,</span> <span class="s1">&#39;tests&#39;</span><span class="p">,</span> <span class="s1">&#39;1FMO.pdb&#39;</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span> <span class="o">=</span> <span class="n">pyKVFinder</span><span class="p">(</span><span class="n">pdb</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span> <span class="o">=</span> <span class="n">pyKVFinder</span><span class="o">.</span><span class="n">run_workflow</span><span class="p">(</span><span class="n">pdb</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span><span class="o">.</span><span class="n">export_all</span><span class="p">()</span>
</pre></div>
</div>
Expand Down Expand Up @@ -510,10 +510,10 @@ <h1>pyKVFinder.pyKVFinderResults<a class="headerlink" href="#pykvfinder-pykvfind
</ul>
</div>
<p class="rubric">Example</p>
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="kn">from</span> <span class="nn">pyKVFinder</span> <span class="kn">import</span> <span class="n">pyKVFinder</span>
<span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">os</span>
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">os</span>
<span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">pyKVFinder</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">pdb</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">dirname</span><span class="p">(</span><span class="n">pyKVFinder</span><span class="o">.</span><span class="vm">__file__</span><span class="p">),</span> <span class="s1">&#39;data&#39;</span><span class="p">,</span> <span class="s1">&#39;tests&#39;</span><span class="p">,</span> <span class="s1">&#39;1FMO.pdb&#39;</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span> <span class="o">=</span> <span class="n">pyKVFinder</span><span class="p">(</span><span class="n">pdb</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span> <span class="o">=</span> <span class="n">pyKVFinder</span><span class="o">.</span><span class="n">run_workflow</span><span class="p">(</span><span class="n">pdb</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span><span class="o">.</span><span class="n">plot_frequencies</span><span class="p">()</span>
</pre></div>
</div>
Expand Down Expand Up @@ -541,10 +541,10 @@ <h1>pyKVFinder.pyKVFinderResults<a class="headerlink" href="#pykvfinder-pykvfind
and so on.</p>
</div>
<p class="rubric">Example</p>
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="kn">from</span> <span class="nn">pyKVFinder</span> <span class="kn">import</span> <span class="n">pyKVFinder</span>
<span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">os</span>
<div class="doctest highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">os</span>
<span class="gp">&gt;&gt;&gt; </span><span class="kn">import</span> <span class="nn">pyKVFinder</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">pdb</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">dirname</span><span class="p">(</span><span class="n">pyKVFinder</span><span class="o">.</span><span class="vm">__file__</span><span class="p">),</span> <span class="s1">&#39;data&#39;</span><span class="p">,</span> <span class="s1">&#39;tests&#39;</span><span class="p">,</span> <span class="s1">&#39;1FMO.pdb&#39;</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span> <span class="o">=</span> <span class="n">pyKVFinder</span><span class="p">(</span><span class="n">pdb</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span> <span class="o">=</span> <span class="n">pyKVFinder</span><span class="o">.</span><span class="n">run_workflow</span><span class="p">(</span><span class="n">pdb</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">results</span><span class="o">.</span><span class="n">write</span><span class="p">()</span>
</pre></div>
</div>
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