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semantic changes to network examples #124

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merged 6 commits into from
Mar 1, 2019
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espenhgn
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Coverage Status

Coverage remained the same at 83.882% when pulling 2ac3b92 on espenhgn:networkfix into 8a4eb45 on LFPy:master.

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@coveralls
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Coverage Status

Coverage remained the same at 83.882% when pulling 2ac3b92 on espenhgn:networkfix into 8a4eb45 on LFPy:master.

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coveralls commented Feb 20, 2019

Coverage Status

Coverage remained the same at 83.882% when pulling 1d5a55b on espenhgn:networkfix into 8a4eb45 on LFPy:master.

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Since PR #120 & #117 fixed some issues with setting synaptic parameters and activation times, this meant that the example network required an update to its parameters. This is what the output looks like now:
figure_5.pdf

Due to differences in some synaptic parameters, it is probably not possible to get back the exact state that resulted earlier. Additional fine tuning could probably bring it closer, but I'm not sure if it is worth the effort.

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Should add; the PR fixes some deprecated h5py and matplotlib codes, and supports Python3 as well. The Neurotools.parameters module has been swapped with a freestanding version that supports Python3.

@torbjone , can I just merge this?

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torbjone commented Mar 1, 2019

Go ahead and merge!

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espenhgn commented Mar 1, 2019

Go ahead and merge!

Done!

@espenhgn espenhgn merged commit afd5ea9 into LFPy:master Mar 1, 2019
@espenhgn espenhgn deleted the networkfix branch March 1, 2019 09:32
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3 participants