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Release 2.1.0

Release 2.1.0 #174

Triggered via pull request March 18, 2024 14:09
Status Failure
Total duration 2m 55s
Artifacts

ci.yml

on: pull_request
Matrix: lint
Matrix: test-functional-other
Matrix: test-functional-python-tools
Matrix: test
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3 errors and 44 warnings
test-functional-python-tools (3.11, snakemake)
Process completed with exit code 1.
test-functional-python-tools (3.11, miniwdl)
The job was canceled because "_3_11_snakemake" failed.
test-functional-python-tools (3.11, miniwdl)
The operation was canceled.
docs
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
docs
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
docs
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docs
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
lint (3.8)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
lint (3.8)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
lint (3.8)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
lint (3.8)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.11)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
test (3.11)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test (3.11)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.11)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.9)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
test (3.9)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test (3.9)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.9)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test-functional-python-tools (3.11, snakemake)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
test-functional-python-tools (3.11, snakemake)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test-functional-python-tools (3.11, snakemake)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test-functional-python-tools (3.11, snakemake)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.12)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
test (3.12)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test (3.12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.12)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.8)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
test (3.8)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test (3.8)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.8)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test-functional-python-tools (3.11, miniwdl)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test-functional-python-tools (3.11, miniwdl)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.10)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
test (3.10)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, actions/setup-python@v2, codecov/codecov-action@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test (3.10)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.10)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test-functional-other (nextflow)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, conda-incubator/setup-miniconda@v2.0.1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
test-functional-other (nextflow)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, conda-incubator/setup-miniconda@v2.0.1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test-functional-other (nextflow)
Warning: 'defaults' already in 'channels' list, moving to the top
test-functional-other (nextflow)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test-functional-other (nextflow)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test-functional-other (cromwell)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2.3.4, conda-incubator/setup-miniconda@v2.0.1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
test-functional-other (cromwell)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2.3.4, conda-incubator/setup-miniconda@v2.0.1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test-functional-other (cromwell)
Warning: 'defaults' already in 'channels' list, moving to the top
test-functional-other (cromwell)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test-functional-other (cromwell)
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/