circle.yml

# Controls the build environment
machine:
  python:
    version: 3.5.2
  environment:
    PATH: /home/ubuntu/miniconda3/bin:$PATH

dependencies:
  override:
    # Moving to nilearn directory before performing the installation.
    - cd ~/pelops
    - source testci/install.sh:
        environment:
            DISTRIB: "conda"
            PYTHON_VERSION: "3.5"
            NUMPY_VERSION: "*"
            SCIPY_VERSION: "*"
            SCIKIT_LEARN_VERSION: "*"
            MATPLOTLIB_VERSION: "*"
    - conda install -y opencv hdfs3
    - conda install -y pytest pytest-cov pillow h5py scipy scikit-image
    - /home/ubuntu/miniconda3/bin/pip install imageio
    - /home/ubuntu/miniconda3/bin/pip install tensorflow==0.12.* git+git://github.com/fchollet/keras.git@2ad3544b017fe9c0d7a25ef0640baa52281372b5

# Set up the commands to run as a test (override), as well as the commands to
# run before (pre) and after (post).
test:
  pre:
    - mkdir -p $CIRCLE_TEST_REPORTS/junit/
  override:
    # Test installation via pip
    - cd /home/ubuntu/pelops && /home/ubuntu/miniconda3/bin/pip install .
    # Test importing installed package
    - /home/ubuntu/miniconda3/bin/python3 -c "import pelops; import pelops.datasets"
    # Run pytest tests
    - cd /home/ubuntu/pelops && /home/ubuntu/miniconda3/bin/python3 -m pytest -v --cov --cov-report=term-missing:skip-covered --junitxml=$CIRCLE_TEST_REPORTS/junit/junit_output.xml
  post:
    - bash <(curl -s https://codecov.io/bash) -t 08234947-61d0-48ea-b0f0-1c82d3f2dfd7