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Source code for "Frequent assembly of chimeric complexes in the protein interaction network of an interspecies hybrid"

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Source code for

Frequent assembly of chimeric complexes in the protein interaction network of an interspecies hybrid

Rohan Dandage*1,2,3,4, Caroline M. Berger*1,2,3,4, Isabelle Gagnon-Arsenault1,2,3,4, Kyung-Mee Moon5, Richard Greg Stacey5, Leonard J. Foster5, and Christian R. Landry1,2,3,4
* The authors contributed equally to this work

  1. Département de Biochimie, Microbiologie et Bio-informatique, Faculté des sciences et de génie, Université Laval, Québec, Québec, G1V 0A6, Canada
  2. PROTEO, Le réseau québécois de recherche sur la fonction, la structure et l’ingénierie des protéines, Université Laval, Québec, Québec, G1V 0A6, Canada
  3. Centre de Recherche en Données Massives (CRDM), Université Laval, Québec, Québec, G1V 0A6, Canada
  4. Département de Biologie, Faculté des sciences et de génie, Université Laval, Québec, Québec, G1V 0A6, Canada
  5. Department of Biochemistry & Molecular Biology, and Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, V6T 1Z4, Canada.

Requirements

  1. python 3.6
  2. Anaconda package distributor
  3. rohan (v0.2.4)

Installing python dependencies

pip install -r requirements.txt

Contents

Description Path
Analysis code plots.py
Data files data.zip
Figures source code figures.py

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