add make cmd - clean

[Borda]

What does this PR do?

add cleaning command and drop the deprecated update.sh

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[codecov]

Codecov Report

Merging #5204 (74dd2c5) into master (c8eda3f) will not change coverage.
The diff coverage is n/a.

@@          Coverage Diff           @@
##           master   #5204   +/-   ##
======================================
  Coverage      93%     93%           
======================================
  Files         134     134           
  Lines        9933    9933           
======================================
  Hits         9247    9247           
  Misses        686     686