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SI data for paper "AutoSolvate: A toolkit for automating quantum chemistry design and discovery of solvated molecules"
Liu-group/SI_data_AutoSolvate
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Folder structure: ``` ├── README.txt ├── features.csv ├── closeness-solvent-dependency.csv ├── closeness-solute-dependency.csv ├── reorganization-energy.csv ├── xyz │ └── *.xyz ├── example.py └── ML-GB.pkl ``` # Description: ## This zip file includes three csv file: features.csv contains the ML model features (charge and SOAP descriptors) for Fig. 8; closeness-solute-dependency.csv contains the solvent-solute closeness dependent on solvent shown in Fig. 9, including 16 solutes in 5 solvents; closeness-solvent-dependency.csv contains MDDF, charge and solvent-solute closeness for the 166 OROP systems solvated in acetonitrile. reorganization-energies.csv contains the outer-sphere, inner-sphere and total reorganization energies and the outer-sphere contribution percentages. ## Solute xyz files For 166 organic solutes selected from the ROP313 dataset the initial xyz structures are provided. ## Machine learning model ML-GB.pkl is the Gradient Boost machine learning model that predicts the solvent-solute closeness of solute molecules in MeCN solvent based on the features listed in features.csv ## Python Script example.py demonstrates how to load the pkl file of the Machine learning model ML-GB.pkl together with the training and test features.
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SI data for paper "AutoSolvate: A toolkit for automating quantum chemistry design and discovery of solvated molecules"
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