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Version 3.3.2 update #263
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Merged
Version 3.3.2 update #263
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minor api bug fixes
api fix to ontology return
added passage of cutoffs to Analysis::get_md5_abundaces
added option to not return full metagenome metadata in matrix api
added 'permission' attribute to notebook metadata: view or edit
updated authentication for kbase
added migs verbosity option to metagenome resource
fixed kbase id parsing
Added status resource for asynchronous calls and matrix resource option to perform asynchronous calls.
Changed status token to id. Fixed url and other stuff.
added pcoa resource
…that are dependent on which user is doing the querying, can be cached.
Added user login to memcache key
…nit to avoid PPO error "ERROR: resource request failed. There must be a unique index on the combination of attributes passed. at /mcs/bio/mg-rast/api/sites/MG-RAST/site/lib/PPO/DBObject.pm line 429."
Fix for sequenceset resource.
notebook api update
notebook api: added deletion (really just setting a 'deleted' attribute in shock node)
… of inputted status: public, private, both
api updates: notebook timestamp, 'status' option with metagenome
… creating sql errors. Also, removed requirement that search results from from 'M5NR' except when searching organisms because that is the only annotation for which we calculated and recorded the M5NR abundance information.
Fixed a couple of MG-RAST search errors.
…es in BLAT alignments causing a bunch of duplicates on the BLAT alignments page.
Fixed bug in code where same sequence was being included multiple times in BLAT alignments causing a bunch of duplicates on the BLAT alignments page.
api metagenome fix
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