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Hyungro Lee committed Jul 6, 2015
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73 changes: 36 additions & 37 deletions docs/source/results.rst
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Expand Up @@ -6,43 +6,42 @@ Four sample genomes were tested with MGEScan-LTR and MGEScan-nonLTR programs.
D. melanogaster
-------------------------------------------------------------------------------

* :download:`dm3.en <sample/dm3.en>`
* :download:`dm3.gff3 <sample/dm3.gff3>`
:download:`dm3.rt <sample/dm3.rt>`
:download:`dm3.ltr.out <sample/dm3.ltr.out>`
:download:`dm3.ltr.out <sample/dm3.ltr.out.txt>`
* :download:`dm3.en <sample/dm3.en.txt>`
* :download:`dm3.gff3 <sample/dm3.gff3.txt>`
* :download:`dm3.rt <sample/dm3.rt.txt>`
* :download:`dm3.ltr.out <sample/dm3.ltr.out.txt>`

Extra:

:download:`en <sample/dm3/data/info/validation/en>`
:download:`rt <sample/dm3/data/info/validation/rt>`
:download:`R2.rt.pep <sample/dm3/data/info/full/R2/R2.rt.pep>`
:download:`R2.rt.dna <sample/dm3/data/info/full/R2/R2.rt.dna>`
:download:`R2.dna <sample/dm3/data/info/full/R2/R2.dna>`
:download:`R2.pep <sample/dm3/data/info/full/R2/R2.pep>`
:download:`I.en.dna <sample/dm3/data/info/full/I/I.en.dna>`
:download:`I.rt.dna <sample/dm3/data/info/full/I/I.rt.dna>`
:download:`I.en.pep <sample/dm3/data/info/full/I/I.en.pep>`
:download:`I.pep <sample/dm3/data/info/full/I/I.pep>`
:download:`I.dna <sample/dm3/data/info/full/I/I.dna>`
:download:`I.rt.pep <sample/dm3/data/info/full/I/I.rt.pep>`
:download:`Jockey.en.dna <sample/dm3/data/info/full/Jockey/Jockey.en.dna>`
:download:`Jockey.rt.pep <sample/dm3/data/info/full/Jockey/Jockey.rt.pep>`
:download:`Jockey.dna <sample/dm3/data/info/full/Jockey/Jockey.dna>`
:download:`Jockey.en.pep <sample/dm3/data/info/full/Jockey/Jockey.en.pep>`
:download:`Jockey.rt.dna <sample/dm3/data/info/full/Jockey/Jockey.rt.dna>`
:download:`Jockey.pep <sample/dm3/data/info/full/Jockey/Jockey.pep>`
:download:`R1.dna <sample/dm3/data/info/full/R1/R1.dna>`
:download:`R1.en.pep <sample/dm3/data/info/full/R1/R1.en.pep>`
:download:`R1.pep <sample/dm3/data/info/full/R1/R1.pep>`
:download:`R1.en.dna <sample/dm3/data/info/full/R1/R1.en.dna>`
:download:`R1.rt.dna <sample/dm3/data/info/full/R1/R1.rt.dna>`
:download:`R1.rt.pep <sample/dm3/data/info/full/R1/R1.rt.pep>`
:download:`CR1.en.dna <sample/dm3/data/info/full/CR1/CR1.en.dna>`
:download:`CR1.dna <sample/dm3/data/info/full/CR1/CR1.dna>`
:download:`CR1.pep <sample/dm3/data/info/full/CR1/CR1.pep>`
:download:`CR1.rt.pep <sample/dm3/data/info/full/CR1/CR1.rt.pep>`
:download:`CR1.rt.dna <sample/dm3/data/info/full/CR1/CR1.rt.dna>`
:download:`CR1.en.pep <sample/dm3/data/info/full/CR1/CR1.en.pep>`
:download:`nonltr.gff3 <sample/dm3/data/info/nonltr.gff3>`

* :download:`en <sample/dm3/data/info/validation/en.txt>`
* :download:`rt <sample/dm3/data/info/validation/rt.txt>`
* :download:`R2.rt.pep <sample/dm3/data/info/full/R2/R2.rt.pep.txt>`
* :download:`R2.rt.dna <sample/dm3/data/info/full/R2/R2.rt.dna.txt>`
* :download:`R2.dna <sample/dm3/data/info/full/R2/R2.dna.txt>`
* :download:`R2.pep <sample/dm3/data/info/full/R2/R2.pep.txt>`
* :download:`I.en.dna <sample/dm3/data/info/full/I/I.en.dna.txt>`
* :download:`I.rt.dna <sample/dm3/data/info/full/I/I.rt.dna.txt>`
* :download:`I.en.pep <sample/dm3/data/info/full/I/I.en.pep.txt>`
* :download:`I.pep <sample/dm3/data/info/full/I/I.pep.txt>`
* :download:`I.dna <sample/dm3/data/info/full/I/I.dna.txt>`
* :download:`I.rt.pep <sample/dm3/data/info/full/I/I.rt.pep.txt>`
* :download:`Jockey.en.dna <sample/dm3/data/info/full/Jockey/Jockey.en.dna.txt>`
* :download:`Jockey.rt.pep <sample/dm3/data/info/full/Jockey/Jockey.rt.pep.txt>`
* :download:`Jockey.dna <sample/dm3/data/info/full/Jockey/Jockey.dna.txt>`
* :download:`Jockey.en.pep <sample/dm3/data/info/full/Jockey/Jockey.en.pep.txt>`
* :download:`Jockey.rt.dna <sample/dm3/data/info/full/Jockey/Jockey.rt.dna.txt>`
* :download:`Jockey.pep <sample/dm3/data/info/full/Jockey/Jockey.pep.txt>`
* :download:`R1.dna <sample/dm3/data/info/full/R1/R1.dna.txt>`
* :download:`R1.en.pep <sample/dm3/data/info/full/R1/R1.en.pep.txt>`
* :download:`R1.pep <sample/dm3/data/info/full/R1/R1.pep.txt>`
* :download:`R1.en.dna <sample/dm3/data/info/full/R1/R1.en.dna.txt>`
* :download:`R1.rt.dna <sample/dm3/data/info/full/R1/R1.rt.dna.txt>`
* :download:`R1.rt.pep <sample/dm3/data/info/full/R1/R1.rt.pep.txt>`
* :download:`CR1.en.dna <sample/dm3/data/info/full/CR1/CR1.en.dna.txt>`
* :download:`CR1.dna <sample/dm3/data/info/full/CR1/CR1.dna.txt>`
* :download:`CR1.pep <sample/dm3/data/info/full/CR1/CR1.pep.txt>`
* :download:`CR1.rt.pep <sample/dm3/data/info/full/CR1/CR1.rt.pep.txt>`
* :download:`CR1.rt.dna <sample/dm3/data/info/full/CR1/CR1.rt.dna.txt>`
* :download:`CR1.en.pep <sample/dm3/data/info/full/CR1/CR1.en.pep.txt>`
* :download:`nonltr.gff3 <sample/dm3/data/info/nonltr.gff3.txt>`
*
0 docs/source/sample/dm3.en → docs/source/sample/dm3.en.txt
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0 docs/source/sample/dm3.gff3 → docs/source/sample/dm3.gff3.txt
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