container tar fix (#45)

* remove old dockerfile and add in apptainer def file

* remove old data modules

* remove docker ignore

* add se config, targets, and parameters

* update targets comments

* add conda environment

* install conda-lock as dev dep

* add conda lock

* get container build working

* add container build workflow

* fix up imports and add fetch and segments modules

* add authenticate to mldatafind modules

* add dev mode

* clean up base sandbox tasks

* update segment min duration to optional

* fix condor imports

* debug

* get fetch working

* clean readme

* remove testing workflow

* fix up container build workflow]

* build sandbox outside of mldatafind dir

* build sandbox outside of mldatafind dir

* add dummy test

* some debug statements

* some debug statements

* fix path

* add law overhal branch for container build

* fix tarring

.github/workflows/container-build.yaml

@@ -81,7 +81,8 @@ jobs:
           --privileged \
           --entrypoint /bin/bash \
           quay.io/singularity/singularity:v3.8.1 \
-          -c 'singularity exec --env PATH=${{ env.PATH }} /opt/sandbox pytest && if [ "${{ github.event_name == 'push'}}" == "true" ]; then tar -czf /opt/mldatafind -C /opt/mldatafind .; fi'
+          -c 'singularity exec --env PATH=${{ env.PATH }} /opt/sandbox pytest && if [ "${{ github.event_name == 'push'}}" == "true" ]; then tar -czf /opt/app.tar.gz -C /opt/sandbox .; fi'
+
 
     # now copy the fs contents into an empty
     # container and push it to the registry,