This is a Python package for determining drift of a sample in a STORM microscope using a stack of bright-field images. An input of a bright-field image stack, and a .csv file with STORM localizations is the input, and the program outputs a drift-corrected version of the .csv file.
- Clone the repository.
sudo python setup.py install
Installation requires NumPy, SciPy, libtiff, Pandas and Matplotlib installed.
Refer to the example.py file for input parameter description and usage.