Shiny tool implementations of the model from the eLife article: An in silico FSHD muscle fibre for modelling DUX4 dynamics and predicting the impact of therapy (https://elifesciences.org/articles/88345). These tools allow the pre-screening of theraputic strategies via the modification of model parameters.
Web applications of the tools are hosted at:
- Compartment Models: https://crsbanerji.shinyapps.io/compartment_models/
- Cellular Automaton: https://crsbanerji.shinyapps.io/ca_shiny/
- Survival Analysis: https://crsbanerji.shinyapps.io/survival_sim/
Alternatively, clone this repository and open an R terminal in the directory of the shiny app of interest.
Run ui.r and server.r to create the objects ui and server. Then run shinyApp(ui, server) to open a local server.
Use install.packages() to install any required packages.
Tested on R version 4.2.3.