Postdoctoral researcher at Barts Cancer Institute. Interested in theoretical biology, spatial modelling of cancer, soft matter physics, statistical physics
- London
- @magnushaughey
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HepatocyteClonalDynamics
HepatocyteClonalDynamics PublicSimulating spatial dynamics of homeostatic renewal in the hepatic lobule.
C++ 1
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liverMitoDNAPipeline
liverMitoDNAPipeline PublicSnakemake pipeline for calling somatic mtDNA single nucleotide variants, used in Passman et al 2021
Python
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CancerSubclonalPatterns
CancerSubclonalPatterns PublicLattice based 2D spatial modelling of subclonal evolution in cancer
C++ 1
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spatial_ecDNA_patterns
spatial_ecDNA_patterns PublicSimulations of spatial patterns of ecDNA content in expanding tumour cell populations
C++
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