Skip to content

TreeAdmin is a small Matlab extension to the TREES toolbox (www.treestoolbox.org). Its graphical user interface helps to view and categorize morphologies reconstructed with TREES toolbox.

License

Notifications You must be signed in to change notification settings

MarcelBeining/TreeAdmin

Repository files navigation

GitHub tag GitHub top language GitHub GitHub contributors GitHub repo size in bytes GitHub issues

TreeAdmin

TreeAdmin is a small Matlab extension to the TREES toolbox. Its graphical user interface helps to view and categorize morphologies reconstructed with TREES toolbox. It is one of the tools used (and should be cited like this) for the paper Beining M*, Jungenitz T*, Radic T, Deller T, Cuntz H, Jedlicka P, Schwarzacher SW: Adult-born dentate granule cells show a critical period of dendritic reorganization and are distinct from developmentally born cells. Brain Structure and Function 2017, 222(3):1427-1446.

Getting started

  • Simply run TreeAdmin.m and load folders of morphologies or single morphology files by clicking on the icon in the upper left.
  • The submodules masterplotter has to be part of the Matlab path
  • TREES toolbox has to be installed and part of the Matlab path

Licensing

This software is under MIT license, that means it's absolutely free for any developer to build commercial and opensource software on top of it, but use it at your own risk with no warranties, as is.

About

TreeAdmin is a small Matlab extension to the TREES toolbox (www.treestoolbox.org). Its graphical user interface helps to view and categorize morphologies reconstructed with TREES toolbox.

Topics

Resources

License

Stars

Watchers

Forks

Packages

No packages published