fixing links again

McTavishLab · Aug 11, 2021 · 7776bbc · 7776bbc
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Showing 6 changed files with 11 additions and 5 deletions.
diff --git a/README.Rmd b/README.Rmd
@@ -26,7 +26,7 @@ IS_README <- TRUE
 <p></p>
 
 
-```{r child="docs/mds/intro.md"}
+```{r child="docs/mds/intro-part1.md"}
 
 ```
 

diff --git a/README.md b/README.md
@@ -34,7 +34,7 @@ project.
 Physcraper also leverages on programmatic tools from the
 [TreeBASE](https://treebase.org/treebase-web/urlAPI.html) project and
 [NCBI](https://www.ncbi.nlm.nih.gov/home/develop/api/), as well as
-multiple software projects listed as [requirements](#Requirements)
+multiple software projects listed as [requirements](#requirements)
 below, to create an automatic and reproducible workflow for
 phylogenetics.
 

diff --git a/docs/mds/intro.md → docs/mds/intro-part1.md b/docs/mds/intro.md → docs/mds/intro-part1.md
diff --git a/docs/mds/intro-part2.md b/docs/mds/intro-part2.md
@@ -0,0 +1,5 @@
+Physcraper also leverages on programmatic tools from the
+[TreeBASE](https://treebase.org/treebase-web/urlAPI.html) project and
+[NCBI](https://www.ncbi.nlm.nih.gov/home/develop/api/), as well as multiple software
+projects listed as [requirements](#id1)
+below, to create an automatic and reproducible workflow for phylogenetics.
diff --git a/docs/mds/intro-requirements.md b/docs/mds/intro-requirements.md
@@ -15,8 +15,7 @@ Note that BLAST + is automatically installed when [installing Physcraper using A
 *Camacho, C., Coulouris, G., Avagyan, V. et al. BLAST+: architecture and applications. BMC Bioinformatics 10, 421 (2009).* doi: [10.1186/1471-2105-10-421](https://doi.org/10.1186/1471-2105-10-421)
 
 <br>
-Physcraper relies on the following Python packages that are <b>automatically</b>
- installed:
+Physcraper relies on the following Python packages that are <b>automatically</b> installed:
 
 - [argparse](https://docs.python.org/3/library/argparse.html)
 - [biopython](https://biopython.org/) <br>

diff --git a/docs/source/index.rst b/docs/source/index.rst
@@ -7,7 +7,9 @@ Welcome to Physcraper's documentation!
 ======================================
 .. mdinclude:: ../mds/intro-header.md
 
-.. mdinclude:: ../mds/intro.md
+.. mdinclude:: ../mds/intro-part1.md
+
+.. mdinclude:: ../mds/intro-part2.md
 
 .. mdinclude:: ../mds/citation.md