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snacktavish committed Jul 1, 2020
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17 changes: 17 additions & 0 deletions docs/mds/FindTrees.md
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# Searching for studies

To search for trees on OpenTree with your taxon of interest, you can use
find_trees.py


usage: find_trees.py [-h] [-t TAXON_NAME] [-ott OTT_ID] [-tb] [-o OUTPUT]

optional arguments:
-h, --help show this help message and exit
-t TAXON_NAME, --taxon_name TAXON_NAME
Name of search taxon
-ott OTT_ID, --ott_id OTT_ID
Name of search taxon
-tb, --treebase Rturn studies with treebase data only
-o OUTPUT, --output OUTPUT
Output file path
4 changes: 4 additions & 0 deletions docs/source/find_trees.rst
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Finding data
============

.. mdinclude:: ../mds/FindTrees.md

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