small changes

MedVisBonn · Dec 3, 2020 · ae3b464 · ae3b464
1 parent b518e0c
commit ae3b464
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Showing 2 changed files with 5 additions and 8 deletions.
diff --git a/eyepy/core/base.py b/eyepy/core/base.py
@@ -297,7 +297,7 @@ def drusen(self):
         return self._oct_obj.drusen[..., self.index]
 
     def plot(self, ax=None, layers=None, drusen=False, layers_kwargs=None,
-             layers_color=None, annotation_only=False, region=np.s_[...]):
+             layers_color=None, annotation_only=False, region=np.s_[:,:]):
         """ Plot B-Scan with segmented Layers """
         if ax is None:
             ax = plt.gca()
@@ -410,7 +410,6 @@ def __init__(self,
 
         self._drusen = None
         self._drusen_raw = None
-        self._layers_raw = None
 
         self._eyepy_id = None
         if data_path is None:
@@ -546,10 +545,7 @@ def layers_raw(self):
         A flip on the B-Scan axis is needed to locate the first B-Scan at the
         bottom of the height map.
         """
-        if self._layers_raw is None:
-            self._layers_raw = np.flip(np.stack([x.layers.data
-                                         for x in self], axis=1), axis=1)
-        return self._layers_raw
+        return np.flip(np.stack([x.layers.data for x in self], axis=1), axis=1)
 
     @property
     def layers(self):

diff --git a/eyepy/core/drusen.py b/eyepy/core/drusen.py
@@ -45,8 +45,9 @@ def __init__(self, degree=3, iterations=5, outlier_threshold=5,
         self.voxel_size = voxel_size
 
     def filter(self, drusen_map):
-        return filter_by_height(drusen_map, self.minimum_height,
-                                self.voxel_size)
+        return drusen_map
+        #return filter_by_height(drusen_map, self.minimum_height,
+        #                        self.voxel_size)
         #return filter_by_depth(d, self.minimum_depth)
 
     def find(self, oct_obj):