work in progress register nir/cfp

.gitignore

@@ -100,3 +100,6 @@ ENV/
 
 # mypy
 .mypy_cache/
+
+# Pycharm
+.idea/

eyepy/__init__.py

@@ -3,5 +3,9 @@
 """Top-level package for eyepy."""
 
 __author__ = """Olivier Morelle"""
-__email__ = 'oli4morelle@gmail.com'
-__version__ = '0.1.0'
+__email__ = "oli4morelle@gmail.com"
+__version__ = "0.1.0"
+
+from . import io
+from . import preprocess
+from . import register

eyepy/io/__init__.py

@@ -0,0 +1 @@
+from .he_vol import VolReader

eyepy/io/base.py

@@ -0,0 +1,26 @@
+import abc
+
+
+class OctReader(abc.ABC):
+    def __init__(self):
+        pass
+
+    @abc.abstractmethod
+    def read(self, filepath):
+        """Returns an OCT object"""
+        pass
+
+    @abc.abstractmethod
+    def read_meta(self, filepath):
+        """Returns only the OCT meta data"""
+        pass
+
+    @abc.abstractmethod
+    def read_bscans(self, filepath):
+        """Returns only the B-scans"""
+        pass
+
+    @abc.abstractmethod
+    def read_nir(self, filepath):
+        """Returns only the near-infrared fundus reflectance (NIR) acquired by an scanning laser ophthalmoscope (SLO)"""
+        pass