update to latest mojo nightly

MoSafi2 · May 10, 2024 · faeeeb5 · faeeeb5
1 parent 556a965
commit faeeeb5
Show file tree

Hide file tree

Showing 3 changed files with 6 additions and 8 deletions.
diff --git a/blazeseq/iostream.mojo b/blazeseq/iostream.mojo
@@ -11,7 +11,6 @@ from blazeseq.CONSTS import (
 from pathlib import Path
 import time
 from tensor import Tensor
-from algorithm.swap import swap
 from utils.static_tuple import InlineArray
 
 

diff --git a/blazeseq/record.mojo b/blazeseq/record.mojo
@@ -32,9 +32,9 @@ struct FastqRecord(Sized, Stringable, CollectionElement):
         self.QuStr = QS
 
         if quality_schema.isa[String]():
-            self.quality_schema = self._parse_schema(quality_schema.get[String]()[])
+            self.quality_schema = self._parse_schema(quality_schema[String])
         else:
-            self.quality_schema = quality_schema.get[QualitySchema]()[]
+            self.quality_schema = quality_schema[QualitySchema]
 
     fn __init__(
         inout self,
@@ -49,10 +49,10 @@ struct FastqRecord(Sized, Stringable, CollectionElement):
         self.QuHeader = Tensor[I8](QH.as_bytes())
         self.QuStr = Tensor[I8](QS.as_bytes())
         if quality_schema.isa[String]():
-            var q: String  = quality_schema.get[String]()[]
+            var q: String  = quality_schema[String]
             self.quality_schema = self._parse_schema(q)
         else:
-            self.quality_schema = quality_schema.get[QualitySchema]()[]
+            self.quality_schema = quality_schema[QualitySchema]
 
     @always_inline
     fn get_seq(self) -> String:

diff --git a/blazeseq/stats.mojo b/blazeseq/stats.mojo
@@ -8,7 +8,6 @@ from collections import Dict, KeyElement
 import time
 from tensor import Tensor
 from python import Python
-from algorithm.swap import swap
 from utils.static_tuple import StaticTuple
 
 alias py_lib: String = "/home/mohamed/Documents/Projects/BlazeSeq/.pixi/envs/default/lib/python3.12/site-packages/"
@@ -333,8 +332,8 @@ struct QualityDistribution(Analyser):
         #################### Quality  Heatmap #########################
 
         var y = plt.subplots()
-        var fig2 = x[0]
-        var ax2 = x[1]
+        var fig2 = y[0]
+        var ax2 = y[1]
         sns.heatmap(np.flipud(arr).T, cmap="Blues", robust= True, ax = ax2)
         fig2.savefig("QualityDistributionHeatMap.png")