GitHub - ModelDBRepository/244202: A biophysical model of vestibular ganglion neurons (Hight & Kalluri 2016, Ventura & Kalluri 2018)

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Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
Analysis_Ventura and Kalluri 2018		Analysis_Ventura and Kalluri 2018
A_cumulative_distribution_function.m		A_cumulative_distribution_function.m
EPSC_excitation_response.m		EPSC_excitation_response.m
EPSP_SPIKEs.mat		EPSP_SPIKEs.mat
EPSP_SPIKEs_scale5.mat		EPSP_SPIKEs_scale5.mat
II_cumulative_distribution_function.m		II_cumulative_distribution_function.m
I_h_rm.m		I_h_rm.m
I_htk_rm.m		I_htk_rm.m
I_k_rm.m		I_k_rm.m
I_l.m		I_l.m
I_ltk_rm.m		I_ltk_rm.m
I_na_rm.m		I_na_rm.m
I_syn.m		I_syn.m
Single_Compartment_Annotated.m		Single_Compartment_Annotated.m
Spike_Detection_ComparingSpikesandEPSPs.m		Spike_Detection_ComparingSpikesandEPSPs.m
VoltageClampofIKL_complex2.m		VoltageClampofIKL_complex2.m
VoltageClampofIKLplusIKH.m		VoltageClampofIKLplusIKH.m
alpha_beta_h.m		alpha_beta_h.m
alpha_beta_m.m		alpha_beta_m.m
alpha_beta_n.m		alpha_beta_n.m
alpha_func.m		alpha_func.m
alpha_func_blunted.m		alpha_func_blunted.m
alpha_func_elongated.m		alpha_func_elongated.m
append_excel_data.m		append_excel_data.m
boundary_detection.m		boundary_detection.m
boundary_detection_array.m		boundary_detection_array.m
cdf_ii_a.m		cdf_ii_a.m
firing_rate.m		firing_rate.m
generate_EPSC_train.m		generate_EPSC_train.m
inf_tau_a_rm.m		inf_tau_a_rm.m
inf_tau_b_rm.m		inf_tau_b_rm.m
inf_tau_c_rm.m		inf_tau_c_rm.m
inf_tau_h_rm.m		inf_tau_h_rm.m
inf_tau_m_rm.m		inf_tau_m_rm.m
inf_tau_n_htk_rm.m		inf_tau_n_htk_rm.m
inf_tau_n_rm.m		inf_tau_n_rm.m
inf_tau_p_htk_rm.m		inf_tau_p_htk_rm.m
inf_tau_r_rm.m		inf_tau_r_rm.m
inf_tau_w_ltk_rm.m		inf_tau_w_ltk_rm.m
inf_tau_w_ltkcnq_rm.m		inf_tau_w_ltkcnq_rm.m
inf_tau_z_ltkA_rm.m		inf_tau_z_ltkA_rm.m
inf_tau_z_ltk_rm.m		inf_tau_z_ltk_rm.m
inf_tau_z_ltkcnq_rm.m		inf_tau_z_ltkcnq_rm.m
readme.txt		readme.txt
rnd_spike.m		rnd_spike.m
rnd_spikes.m		rnd_spikes.m
save_trial_data.m		save_trial_data.m
single_compart_second_rm.m		single_compart_second_rm.m
spike_detection.m		spike_detection.m
spike_detection_sharp.m		spike_detection_sharp.m

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This is the readme.txt file for the models associated with the 
papers shown below:

1. A paper submitted in 2018

2. Hight AE, Kalluri R. A biophysical model examining the role of low-voltage-activated 
potassium currents in shaping the responses of vestibular ganglion neurons. 
J Neurophysiol. 2016 Aug 01; 116(2):503-21.

To run the simulation type Single_Compartment_Annotated at the Matlab command line.

To control the simulation parameters, open and edit the Single_Compartment_Annotated file.

Analysis scripts for Ventura & Kalluri (2018, submitted) can be found in the Analysis_Ventura & Kalluri subfolder.