adding copyright notice to all files

MouseLand · Jun 13, 2023 · 59bd0cd · 59bd0cd
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diff --git a/cellpose/__main__.py b/cellpose/__main__.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import sys, os, glob, pathlib, time
 import numpy as np
 from natsort import natsorted

diff --git a/cellpose/cli.py b/cellpose/cli.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu and Michael Rariden.
+"""
+
 import argparse
 
 

diff --git a/cellpose/core.py b/cellpose/core.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import os, sys, time, shutil, tempfile, datetime, pathlib, subprocess
 import logging
 import numpy as np

diff --git a/cellpose/dynamics.py b/cellpose/dynamics.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import time, os
 from scipy.ndimage import maximum_filter1d, find_objects
 import torch

diff --git a/cellpose/gui/gui.py b/cellpose/gui/gui.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import sys, os, pathlib, warnings, datetime, tempfile, glob, time
 import gc
 from natsort import natsorted

diff --git a/cellpose/gui/guiparts.py b/cellpose/gui/guiparts.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import PyQt5
 from PyQt5 import QtGui, QtCore, QtWidgets
 from PyQt5.QtGui import QPainter, QPixmap

diff --git a/cellpose/gui/io.py b/cellpose/gui/io.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import os, datetime, gc, warnings, glob, shutil, copy
 from natsort import natsorted
 import numpy as np

diff --git a/cellpose/gui/menus.py b/cellpose/gui/menus.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import PyQt5
 from PyQt5.QtWidgets import QAction
 from . import io

diff --git a/cellpose/io.py b/cellpose/io.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import os, datetime, gc, warnings, glob, shutil
 from natsort import natsorted
 import numpy as np

diff --git a/cellpose/metrics.py b/cellpose/metrics.py
@@ -1,3 +1,6 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
 import numpy as np
 from . import utils, dynamics
 from numba import jit

diff --git a/cellpose/models.py b/cellpose/models.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import os, sys, time, shutil, tempfile, datetime, pathlib, subprocess
 from pathlib import Path
 import numpy as np

diff --git a/cellpose/plot.py b/cellpose/plot.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import os
 import numpy as np
 import cv2

diff --git a/cellpose/resnet_torch.py b/cellpose/resnet_torch.py
@@ -1,3 +1,6 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
 
 import os, sys, time, shutil, tempfile, datetime, pathlib, subprocess
 import numpy as np

diff --git a/cellpose/test_mkl.py b/cellpose/test_mkl.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import os, sys
 os.environ["MKLDNN_VERBOSE"]="1"
 import numpy as np

diff --git a/cellpose/transforms.py b/cellpose/transforms.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import numpy as np
 import warnings
 import cv2

diff --git a/cellpose/utils.py b/cellpose/utils.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import os, warnings, time, tempfile, datetime, pathlib, shutil, subprocess
 from tqdm import tqdm
 from urllib.request import urlopen

diff --git a/cellpose/version.py b/cellpose/version.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 from importlib.metadata import PackageNotFoundError, version
 import sys 
 from platform import python_version

diff --git a/paper/1.0/cp_unets.py b/paper/1.0/cp_unets.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import sys, os, time, string, shutil
 from natsort import natsorted
 from glob import glob

diff --git a/paper/1.0/performance_figs.py b/paper/1.0/performance_figs.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import sys, os
 import numpy as np
 import matplotlib.pyplot as plt

diff --git a/paper/2.0/datasets.py b/paper/2.0/datasets.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import sys, os, argparse
 from tifffile import imread, imsave
 import numpy as np

diff --git a/paper/2.0/train_specialists.py b/paper/2.0/train_specialists.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import sys, os, argparse, time
 import numpy as np
 from glob import glob

diff --git a/paper/2.0/train_subsets.py b/paper/2.0/train_subsets.py
@@ -1,3 +1,7 @@
+"""
+Copright © 2023 Howard Hughes Medical Institute, Authored by Carsen Stringer and Marius Pachitariu.
+"""
+
 import sys, os, argparse
 from tifffile import imread, imsave
 import numpy as np