HTSeq Count: allow counts files with more than 2 columns (#2129)

* Htseq: allow counts files with more than 2 columns * [automated] Update CHANGELOG.md * [automated] Update CHANGELOG.md --------- Co-authored-by: MultiQC Bot <multiqc-bot@seqera.io>
MultiQC · Oct 17, 2023 · 10b099a · 10b099a
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -31,6 +31,7 @@
 - **HiCPro**: fix parsing scientific notation in hicpro-ashic. Thanks @Just-Roma ([#2126](https://github.com/ewels/MultiQC/pull/2126))
 - **Picard**: MarkDuplicates: Fix parsing mixed strings/numbers, account for missing trailing `0` ([#2083](https://github.com/ewels/MultiQC/pull/2083), [#2094](https://github.com/ewels/MultiQC/pull/2094))
 - **WhatsHap**: Process truncated input with no ALL chromosome ([#2095](https://github.com/ewels/MultiQC/pull/2095))
+- **HTSeq Count**: allow counts files with more than 2 columns ([#2129](https://github.com/ewels/MultiQC/pull/2129))
 
 ## [MultiQC v1.16](https://github.com/ewels/MultiQC/releases/tag/v1.16) - 2023-09-22
 

diff --git a/multiqc/utils/search_patterns.yaml b/multiqc/utils/search_patterns.yaml
@@ -379,7 +379,7 @@ happy:
   fn: "*.summary.csv"
   contents: "Type,Filter,TRUTH"
 htseq:
-  contents_re: '^(feature\tcount|\w+\t\d+)$'
+  contents_re: '^(feature\tcount|\w+.*\t\d+)$'
   num_lines: 1
 hicexplorer:
   contents: "Min rest. site distance"