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Enhancements to Seqera Platform CLI module #2245

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drpatelh opened this issue Dec 18, 2023 · 1 comment · Fixed by #2248
Open
3 of 4 tasks

Enhancements to Seqera Platform CLI module #2245

drpatelh opened this issue Dec 18, 2023 · 1 comment · Fixed by #2248
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waiting: example data Needs example data before we can proceed

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@drpatelh
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drpatelh commented Dec 18, 2023

Description of feature

Hola!

The core functionality for this module was already added in #2151 #2166 #2167

Seqera CLI v0.9.2 was released a few days ago with additional metadata that would be useful to add to the report as initially listed in #2151 (comment)

Below is a screenshot of the current MultiQC report:

image

  • In the image above is it possible to fix the overflow for the Repository column? The last 3 columns for nf-core/viralrecon are increasing the width of the rows.

  • Run URL

    Add a new Run column after the Sample Name column in the General Statistics table that is just the Run ID e.g. 1h5PlYK4uXvNyE and create a hyperlink for this field to the actual run URL.

    This entry can be found in workflow-metadata.json['runUrl']

  • Workspace name

    Add a Workspace column after the Run column above has been added to the General Statistics table. This could maybe be hidden by default if we want to keep the table size tidy.

    This entry can be found in workflow-metadata.json['workspaceName']

  • Run labels

    Looking into this and will update tomorrow. Can't seem to find it in the dumps from the latest release.

    I will also ping across some test data from the latest release when I have it too!

Good night and God bless!

@ewels ewels linked a pull request Dec 19, 2023 that will close this issue
@ewels
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ewels commented Dec 19, 2023

Still needs run labels, waiting on @drpatelh for that.

@ewels ewels reopened this Dec 19, 2023
@ewels ewels added the waiting: example data Needs example data before we can proceed label Dec 19, 2023
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