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Fix logging spillover #2174

Merged
merged 31 commits into from
Nov 14, 2023
Merged

Fix logging spillover #2174

merged 31 commits into from
Nov 14, 2023

Commits on Oct 27, 2023

  1. Update pre-commit hooks versions

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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  2. Fix

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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  3. Ruff

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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  4. Update hooks and docs

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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  5. ruff --fix

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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  6. Use and apply Ruff formatter

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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  7. Use and apply Ruff formatter

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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  8. Fix further formatting

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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  9. Fix further formatting - 2

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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  10. Merge branch 'master' into add-ruff-linter

    @vladsavelyev
    vladsavelyev committed Oct 27, 2023
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Commits on Nov 3, 2023

  1. Merge branch 'master' into add-ruff-linter

    @vladsavelyev
    vladsavelyev committed Nov 3, 2023
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Commits on Nov 4, 2023

  1. Format linting, remove OrderedDict

    @vladsavelyev
    vladsavelyev committed Nov 4, 2023
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  2. Fix linting

    @vladsavelyev
    vladsavelyev committed Nov 4, 2023
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  3. Fix

    @vladsavelyev
    vladsavelyev committed Nov 4, 2023
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  4. Fix

    @vladsavelyev
    vladsavelyev committed Nov 4, 2023
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Commits on Nov 5, 2023

  1. Clean up

    @vladsavelyev
    vladsavelyev committed Nov 5, 2023
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  2. Fix label on Per-Sequence GC Content

    @vladsavelyev
    vladsavelyev committed Nov 5, 2023
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Commits on Nov 6, 2023

  1. Merge branch 'master' into add-ruff-linter

    @vladsavelyev
    vladsavelyev committed Nov 6, 2023
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Commits on Nov 10, 2023

  1. Merge branch 'master' into add-ruff-linter

    @vladsavelyev
    vladsavelyev committed Nov 10, 2023
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  2. Fix linting

    @vladsavelyev
    vladsavelyev committed Nov 10, 2023
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Commits on Nov 13, 2023

  1. Merge branch 'master' into add-ruff-linter

    @vladsavelyev
    vladsavelyev committed Nov 13, 2023
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  2. Linting

    @vladsavelyev
    vladsavelyev committed Nov 13, 2023
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  3. Remove docs/modules/sentieon.md

    @vladsavelyev
    vladsavelyev committed Nov 13, 2023
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  4. Merge branch 'master' into add-ruff-linter

    @vladsavelyev
    vladsavelyev committed Nov 13, 2023
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  5. Fix

    @vladsavelyev
    vladsavelyev committed Nov 13, 2023
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Commits on Nov 14, 2023

  1. Remove ordered dict

    @vladsavelyev
    vladsavelyev committed Nov 14, 2023
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  2. Fix bug in custom content

    @vladsavelyev
    vladsavelyev committed Nov 14, 2023
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  3. Add r specifiers to regex strings to avoid warnings. Use logger vs lo… 

    …gging
    @vladsavelyev
    vladsavelyev committed Nov 14, 2023
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  4. More regex escaping

    @vladsavelyev
    vladsavelyev committed Nov 14, 2023
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  5. [automated] Update CHANGELOG.md

    @multiqc-bot
    multiqc-bot committed Nov 14, 2023
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  6. Merge branch 'master' into fix-logging-spill

    @vladsavelyev
    vladsavelyev committed Nov 14, 2023
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