Refactor RecurrenceGoal conflict production and solving #1953

	name: Security Scan

	on:
	pull_request:
	branches:
	- develop
	- dev-[0-9]+.[0-9]+.[0-9]+
	push:
	branches:
	- develop
	tags:
	- v*
	workflow_dispatch:

	jobs:
	analyze:
	name: Analyze
	runs-on: ubuntu-latest
	permissions:
	actions: read
	contents: write
	security-events: write

	strategy:
	fail-fast: false
	matrix:
	language: ["java", "javascript"]

	steps:
	- name: Checkout repository
	uses: actions/checkout@v4
	- name: Initialize CodeQL
	uses: github/codeql-action/init@v3
	with:
	languages: ${{ matrix.language }}
	queries: +security-extended
	tools: latest
	- name: Setup Java
	uses: actions/setup-java@v4
	with:
	distribution: "temurin"
	java-version: "21"
	- name: Build
	run: \|
	./gradlew testClasses
	- name: Perform CodeQL Analysis
	uses: github/codeql-action/analyze@v3
	- name: Setup Gradle
	uses: gradle/actions/setup-gradle@v3
	- name: NASA Scrub
	run: \|
	python3 -m pip install nasa-scrub

	results_dir=`realpath ${{ github.workspace }}/../results`
	sarif_files=`find $results_dir -name '*.sarif'`

	for sarif_file in $sarif_files
	do
	output_file="$results_dir/$(basename $sarif_file .sarif).scrub"
	python3 -m scrub.tools.parsers.translate_results $sarif_file $output_file ${{ github.workspace }} scrub
	done

	python3 -m scrub.tools.parsers.csv_parser $results_dir

	echo "RESULTS_DIR=$results_dir" >> $GITHUB_ENV
	- name: Upload Security Scan Results
	uses: actions/upload-artifact@v4
	with:
	name: Security Scan Results - ${{ matrix.language }}
	path: ${{ env.RESULTS_DIR }}

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