Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
Update singu command to latest agat version
  • Loading branch information
Juke34 committed Feb 14, 2023
1 parent 5ac00cf commit 6aa5714
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -152,9 +152,9 @@ Secondly have look at the availabe AGAT biocontainers at [quay.io](https://quay.
Then:
```
# get the chosen AGAT container version
singularity pull docker://quay.io/biocontainers/agat:0.8.0--pl5262hdfd78af_0
singularity pull docker://quay.io/biocontainers/agat:1.0.0--pl5321hdfd78af_0
# run the container
singularity run agat_0.8.0--pl5262hdfd78af_0.sif
singularity run agat_1.0.0--pl5321hdfd78af_0.sif
```

You are now in the container. You can use an AGAT's tool e.g. agat_convert_sp_gxf2gxf.pl doing
Expand Down

0 comments on commit 6aa5714

Please sign in to comment.