avoid empty value for GO term represented by dash (#272)

NBISweden · Jul 13, 2022 · 871d066 · 871d066
1 parent 57d676e
commit 871d066
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/bin/agat_sp_manage_functional_annotation.pl b/bin/agat_sp_manage_functional_annotation.pl
@@ -1014,7 +1014,8 @@ sub parse_interpro_tsv {
       my @go_list = split(/\|/, $go_flat_list); #cut at character |
       foreach my $go_tuple (@go_list) {
         print "GO term: ".$go_tuple."\n" if ($opt_verbose);
-
+        next if $go_tuple eq "-"; #fix kira
+
         if (! grep( /^\Q$go_tuple\E$/, @{$functionData{$db_name}{$mRNAID}} )) { #to avoid duplicate
           $TotalTerm{$db_name}++;
           push ( @{$functionData{$db_name}{$mRNAID}}, $go_tuple );