fix table show

NBISweden · Apr 15, 2021 · ef77ce6 · ef77ce6
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diff --git a/docs/index.rst b/docs/index.rst
@@ -22,6 +22,10 @@ Contents
    topological-sorting-of-gff-features.md
    troubleshooting.md
 
+.. toctree::
+   :maxdepth: 2
+   :caption: General:
+
 .. toctree::
    :maxdepth: 1
    :caption: List of tools:

diff --git a/docs/topological-sorting-of-gff-features.md b/docs/topological-sorting-of-gff-features.md
@@ -29,13 +29,13 @@ Zhigang Lu has made a nice post about his experience trying to find a way to get
 
 ## Tests summary
 
-tool | option in command line | Type of sorting | Comment
--- | -- | -- | -- |
-[AGAT](https://github.com/NBISweden/AGAT) | / | by chromosomes, by gene position, by type (mRNAs then exon, then CDS then alphabetical feature types; then mRNA2 then exon2, then CDS2 then alphabetical feature2 types) | Fix GFF/GTF if needed
-[GenomeTools](https://github.com/genometools/genometools) | -sortlines -tidy -retainids | by chromosomes and positions then random feature type | Lines with the same chromosomes and start positions would be placed randomly, so parent feature lines might sometimes be placed after their children lines.
+| tool      | option in command line | Type of sorting | Comment |
+| ------------- |:-------------:| :-------------:| -------------:|
+[AGAT](https://github.com/NBISweden/AGAT) | / | by chromosomes, by gene position, by type (mRNAs then exon, then CDS then alphabetical feature types; then mRNA2 then exon2, then CDS2 then alphabetical feature2 types) | Fix GFF/GTF if needed |
+[GenomeTools](https://github.com/genometools/genometools) | -sortlines -tidy -retainids | by chromosomes and positions then random feature type | Lines with the same chromosomes and start positions would be placed randomly, so parent feature lines might sometimes be placed after their children lines. |
 [GenomeTools](https://github.com/genometools/genometools) | -retainids | by chromosomes, by gene position, by type (mRNA then children; then mRNA2 then children2), by position (children are sorted by positions) |
-[GFF3sort](https://github.com/billzt/gff3sort) | --precise | by chromosomes and positions then attribute with Parent attribute first.  | move lines with "Parent=" attributes (case insensitive) behind lines without "Parent=" attributes. The goal of GFF3sort is not to obtain a topological sorting but rather getting something that could be indexed optimally by third part tools.
-[gffread](https://github.com/gpertea/gffread) | | By default, chromosomes are kept in the order they were found. With --sort-alpha parameter the chromosomes (reference sequences) are sorted alphabetically | /!\ Some feature types are lost e.g. `gene`, `three_prime_UTR`, `five_prime_UTR`, etc...
+[GFF3sort](https://github.com/billzt/gff3sort) | --precise | by chromosomes and positions then attribute with Parent attribute first.  | move lines with "Parent=" attributes (case insensitive) behind lines without "Parent=" attributes. The goal of GFF3sort is not to obtain a topological sorting but rather getting something that could be indexed optimally by third part tools. |
+[gffread](https://github.com/gpertea/gffread) | | By default, chromosomes are kept in the order they were found. With --sort-alpha parameter the chromosomes (reference sequences) are sorted alphabetically | /!\ Some feature types are lost e.g. `gene`, `three_prime_UTR`, `five_prime_UTR`, etc... |
 
 ## Example 1