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44 Open 21 Closed
44 Open 21 Closed
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Issues list

Test data - Drosophila melanogaster
#95 opened Apr 12, 2024 by gbdias
@gbdias
1
FCS_GX on dev failed
#94 opened Mar 28, 2024 by gbdias
6
Check if GOAT API is easier to parse out then GOAT cli
#92 opened Mar 8, 2024 by mahesh-panchal
Dot plots of putative mitogenomes vs final mitogenomes
#90 opened Mar 6, 2024 by mahesh-panchal
Assembly summary does not contain any assembly stats (N50, length, base composition, etc)
#89 opened Mar 6, 2024 by MartinPippel
Automated codon usage table selection
#88 opened Mar 5, 2024 by mahesh-panchal
Alternative mitogenome strategy needed when MitoHifi fails.
#86 opened Mar 1, 2024 by gbdias
8
Busco doesn't exit with an error when one of the subtools is killed, or print a suitable error message
#85 opened Mar 1, 2024 by mahesh-panchal
Is it better to Kmer count the combined fastq or the parts?
#84 opened Feb 29, 2024 by mahesh-panchal
1
MultiQC report
#83 opened Feb 28, 2024 by mahesh-panchal
@mahesh-panchal
1
Large memory node needed for certain processes
#82 opened Feb 27, 2024 by n-equals-one
2
Out of memory kill issued by slurm but Nextflow process marked as completed.
#81 opened Feb 26, 2024 by mahesh-panchal
New Module: Klumpy enhancement New feature or request
#78 opened Feb 16, 2024 by mahesh-panchal
New Module: TIPP_plastid (chloroplast assembly) enhancement New feature or request
#76 opened Feb 6, 2024 by mahesh-panchal
New Module: Hostile enhancement New feature or request
#75 opened Jan 25, 2024 by mahesh-panchal
New Module: PGAP enhancement New feature or request
#74 opened Jan 8, 2024 by mahesh-panchal
New Module: teloclip enhancement New feature or request
#73 opened Jan 8, 2024 by mahesh-panchal
New Module: OMArk enhancement New feature or request
#71 opened Dec 12, 2023 by mahesh-panchal
New Module: Taxon Kit enhancement New feature or request
#69 opened Nov 24, 2023 by mahesh-panchal
New Module: DNAapler enhancement New feature or request
#62 opened Nov 7, 2023 by mahesh-panchal
New Module: Telomere Identifier enhancement New feature or request
#61 opened Nov 6, 2023 by mahesh-panchal
New Module: CRAQ enhancement New feature or request
#60 opened Oct 31, 2023 by mahesh-panchal
2
Dardel profile
#59 opened Oct 13, 2023 by mahesh-panchal
Reporting a warning when below coverage for GenomeScope and Smudgeplot
#52 opened Sep 21, 2023 by mahesh-panchal
Test Data - Amphimallon solstitiale
#51 opened Sep 18, 2023 by mahesh-panchal
ProTip! Exclude everything labeled bug with -label:bug.