Study and dataset metadata

Study
Study_pk (int)
PI_name (text)
PI_email (text)
Contact_name (text)
Contact_email (text)
Title (text)
Description (text) (optional)
Date (timestamp)
RefDOI (text) [ref to publication] (optional)

Sampleset
Sampleset_pk (int)
Study_pk (int)
Ethnicity (text) [eg “Swedish”] (optional)
Collection (text) [eg. “Swedish Twin Registry”] (optional)
SamplesetSize (int) 

Dataset
Dataset_pk (int)
Sampleset_pk (int)
Browser_uri (text)
Beacon_uri (text)
AverageSequencingDepth (float) (optional)
SequencingType (text) [eg. “WGS”] (optional)
SequencingTechnology (text) [eg. “Illumina HiSeq X”] (optional)
SequencingCentre (text) [name of centre, eg. “NGI, SciLifeLab”] (optional)
DatasetSize (int) [number of sequences aggregated over]


Dataset_version
Dataset_version_pk (int)
Dataset_pk (int)
version (text)
ts (timestamp)
is_current (bool)
Dataset_doi (text)
VariantCallingRef (text) [ref to method description for variant calling, t.ex. PMID or DOI] (optional)
description (text) (optional)
terms_ref (text) [ref to terms description]

Dataset_file
Dataset_file_pk (int)
Dataset_version_pk (int)
name (text)
uri (text)