Expander Agent

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Description

Team Expander Agent: A tool for enhancing query graphs. ARAX exposes all graph reasoning capabilities within a domain specific language: ARAXi. ARAX is a tool for querying, manipulating, filtering, learning on, and exploring biomedical knowledge graphs.

Team Contact:

expander.agent@gmail.com

Steve Ramsey: stephen.ramsey@oregonstate.edu

Eric Deutsch: edeutsch@systemsbiology.org

David Koslicki: dmk333@psu.edu

Translator Reasoner API

Reasoner API v0.9.3 accessible via https://arax.ncats.io/api/arax/v1.4/ui/

Supporting Bespoke APIs

• ARAX API
• ARAX GUI

Knowledge Providers Accessed

• Clinical Data Provider
• Connections Hypothesis Provider
• Exposures Provider
• Genetics Knowledge Provider
• Molecular Data Provider
• Multiomics Provider
• Text Mining Provider
• Service Provider
• RTX-KG2

Source Code

• 
• ARAX
• RTX-KG2

External Documentation

• ARAX examples Notebook
• ARAXi documentation
• Team/Tool/Code Readme

Associated publications

• ARAX: a graph-based modular reasoning tool for translational biomedicine