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AppModel.js
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AppModel.js
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/*global define */
define(['jquery', 'underscore', 'backbone'],
function($, _, Backbone) {
'use strict';
// Application Model
// ------------------
var AppModel = Backbone.Model.extend({
// This model contains all of the attributes for the Application
defaults: {
headerType: 'default',
title: MetacatUI.themeTitle || "Metacat Data Catalog",
emailContact: "support@arcticdata.io",
googleAnalyticsKey: null,
nodeId: null,
searchMode: MetacatUI.mapKey ? 'map' : 'list',
searchHistory: [],
sortOrder: 'dateUploaded+desc',
page: 0,
previousPid: null,
lastPid: null,
anchorId: null,
userProfiles: true,
profileUsername: null,
maxDownloadSize: 3000000000,
// Flag which, when true shows Whole Tale features in the UI
showWholeTaleFeatures: false,
taleEnvironments: ["RStudio", "Jupyter Notebook"],
dashboardUrl: 'https://girder.wholetale.org/api/v1/integration/dataone',
/*
* emlEditorRequiredFields is a hash map of all the required fields in the EML Editor.
* Any field set to true will prevent the user from saving the Editor until a value has been given
*/
emlEditorRequiredFields: {
abstract: true,
alternateIdentifier: false,
funding: true,
generalTaxonomicCoverage: false,
geoCoverage: true,
intellectualRights: true,
keywordSets: false,
methods: false,
samplingDescription: false,
studyExtentDescription: false,
taxonCoverage: false,
temporalCoverage: true,
title: true
},
editableFormats: ["eml://ecoinformatics.org/eml-2.1.1"],
//These error messages are displayed when the Editor encounters an error saving
editorSaveErrorMsg: "Not all of your changes could be submitted.",
editorSaveErrorMsgWithDraft: "Not all of your changes could be submitted " +
"due to a technical error. But, we sent a draft of your edits to " +
"our support team, who will contact " +
"you via email as soon as possible about getting your data package submitted. ",
defaultAccessPolicy: [{
subject: "CN=arctic-data-admins,DC=dataone,DC=org",
read: true,
write: true,
changePermission: true
}],
allowAccessPolicyChanges: false,
baseUrl: window.location.origin || (window.location.protocol + "//" + window.location.host),
// the most likely item to change is the Metacat deployment context
context: '/metacat',
d1Service: '/d1/mn/v2',
d1CNBaseUrl: "https://cn.dataone.org/",
d1CNService: "cn/v2",
d1LogServiceUrl: null,
nodeServiceUrl: null,
viewServiceUrl: null,
packageServiceUrl: null,
publishServiceUrl: null,
authServiceUrl: null,
queryServiceUrl: null,
//If set to false, some parts of the app will send POST HTTP requests to the
// Solr search index via the `/query/solr` DataONE API.
// Set this configuration to true if using Metacat 2.10.2 or earlier
disableQueryPOSTs: false,
defaultSearchFilters: ["all", "attribute", "creator", "dataYear", "pubYear", "id", "taxon", "spatial"],
metaServiceUrl: null,
metacatBaseUrl: null,
metacatServiceUrl: null,
objectServiceUrl: null,
formatsServiceUrl: null,
formatsUrl: "/formats",
resolveServiceUrl: null,
//bioportalSearchUrl: null,
orcidBaseUrl: "https:/orcid.org",
//orcidSearchUrl: null,
//orcidBioUrl: null,
//annotatorUrl: null,
grantsUrl: null,
accountsUrl: null,
pendingMapsUrl: null,
accountMapsUrl: null,
groupsUrl: null,
//signInUrl: null,
signOutUrl: null,
signInUrlOrcid: null,
//signInUrlLdap: null,
tokenUrl: null,
mdqBaseUrl: "https://docker-ucsb-4.dataone.org:30443/quality",
// suidIds and suiteLables must be specified as a list, even if only one suite is available.
suiteIds: ["arctic.data.center.suite.1"],
suiteLabels: ["Arctic Data Center Conformance Suite v1.0"],
// Metrics endpoint url
metricsUrl: 'https://logproc-stage-ucsb-1.test.dataone.org/metrics',
// Metrics flags for the Dataset Landing Page
// Enable these flags to enable metrics display
displayDatasetMetrics: true,
// Controlling individual functionality
// Only works if the parent flags displayDatasetMetrics is enabled
displayDatasetMetricsTooltip: true,
displayDatasetCitationMetric: true,
displayDatasetDownloadMetric: true,
displayDatasetViewMetric: true,
displayDatasetEditButton: true,
displayDatasetQualityMetric: false,
displayDatasetAnalyzeButton: false,
displayMetricModals: true,
displayDatasetControls: true,
/* Hide metrics display for SolrResult models that match the given properties.
* Properties can be functions, which are given the SolrResult model value as a parameter.
* Example:
* {
* formatId: "eml://ecoinformatics.org/eml-2.1.1",
* isPublic: true,
* dateUploaded: function(date){
* return new Date(date) < new Date('1995-12-17T03:24:00');
* }
* }
* This example would hide metrics for any objects that are:
* EML 2.1.1 OR public OR were uploaded before 12/17/1995.
*/
hideMetricsWhen: null,
isJSONLDEnabled: true,
// A lookup map of project names to project seriesIds
projectsMap: {
"DBO": "urn:uuid:3fa6665d-a89f-4cc3-b688-28e0489a45cb"
},
// If true, then archived content is available in the search index.
// Set to false if this MetacatUI is using a Metacat version before 2.10.0
archivedContentIsIndexed: true,
/**
* The default FilterGroups to use in the data catalog search (DataCatalogViewWithFilters)
* This is an array of literal objects that will be converted into FilterGroup models
* @type {object[]}
*/
defaultFilterGroups: [
{
label: "Filter by: ",
filters: [
{
fields: ["attribute"],
label: "Data attribute",
placeholder: "density, length, etc.",
icon: "table",
description: "Measurement type, e.g. density, temperature, species"
},
{
filterType: "ToggleFilter",
fields: ["documents"],
label: "Show only results with data",
trueLabel: null,
falseLabel: null,
trueValue: "*",
icon: "table",
description: "Checking this option will only return packages that include data files. Leaving this unchecked may return packages that only include metadata."
},
{
fields: ["originText"],
label: "Creator",
placeholder: "Name",
icon: "user",
description: "The name of the creator or originator of a dataset"
},
{
filterType: "DateFilter",
fields: ["datePublished", "dateUploaded"],
label: "Publish Year",
rangeMin: 1800,
icon: "calendar",
description: "Only show results that were published within the year range"
},
{
filterType: "DateFilter",
fields: ["beginDate"],
label: "Year of data coverage",
rangeMin: 1800,
icon: "calendar",
description: "Only show results with data collected within the year range"
},
{
fields: ["id", "identifier", "documents", "resourceMap", "seriesId"],
label: "Identifier",
placeholder: "DOI or ID",
icon: "bullseye",
description: "Find datasets if you have all or part of its DOI or ID"
},
{
fields: ["kingdom", "phylum", "class", "order", "family", "genus", "species"],
label: "Taxon",
placeholder: "Class, family, etc.",
icon: "sitemap",
description: "Find data about any taxonomic rank"
},
{
fields: ["siteText"],
label: "Location",
placeholder: "Geographic region",
icon: "globe",
description: "The geographic region or study site, as described by the submitter"
}
]
}
]
},
defaultView: "data",
initialize: function() {
//If no base URL is specified, then user the DataONE CN base URL
if(!this.get("baseUrl")){
this.set("baseUrl", this.get("d1CNBaseUrl"));
this.set("d1Service", this.get("d1CNService"));
}
// these are pretty standard, but can be customized if needed
this.set('metacatBaseUrl', this.get('baseUrl') + this.get('context'));
this.set('viewServiceUrl', this.get('baseUrl') + this.get('context') + this.get('d1Service') + '/views/metacatui/');
this.set('publishServiceUrl', this.get('baseUrl') + this.get('context') + this.get('d1Service') + '/publish/');
this.set('authServiceUrl', this.get('baseUrl') + this.get('context') + this.get('d1Service') + '/isAuthorized/');
this.set('queryServiceUrl', this.get('baseUrl') + this.get('context') + this.get('d1Service') + '/query/solr/?');
this.set('metaServiceUrl', this.get('baseUrl') + this.get('context') + this.get('d1Service') + '/meta/');
this.set('objectServiceUrl', this.get('baseUrl') + this.get('context') + this.get('d1Service') + '/object/');
this.set('registryServiceUrl', this.get('baseUrl') + this.get('context') + '/cgi-bin/register-dataset.cgi');
this.set('ldapwebServiceUrl', this.get('baseUrl') + this.get('context') + '/cgi-bin/ldapweb.cgi');
this.set('metacatServiceUrl', this.get('baseUrl') + this.get('context') + '/metacat');
// Metadata quality report services
this.set('mdqSuitesServiceUrl', this.get("mdqBaseUrl") + "/suites/");
this.set('mdqRunsServiceUrl', this.get('mdqBaseUrl') + "/runs/");
this.set('mdqSuiteIds', this.get("suiteIds"));
this.set('mdqSuiteLabels', this.get("suiteLabels"));
//Set the NSF Award API proxy
if(typeof this.get("grantsUrl") != "undefined")
this.set("grantsUrl", "https://api.nsf.gov/services/v1/awards.json");
//DataONE CN API
if(this.get("d1CNBaseUrl")){
//Account services
if(typeof this.get("accountsUrl") != "undefined"){
this.set("accountsUrl", this.get("d1CNBaseUrl") + this.get("d1CNService") + "/accounts/");
if(typeof this.get("pendingMapsUrl") != "undefined")
this.set("pendingMapsUrl", this.get("accountsUrl") + "pendingmap/");
if(typeof this.get("accountsMapsUrl") != "undefined")
this.set("accountsMapsUrl", this.get("accountsUrl") + "map/");
if(typeof this.get("groupsUrl") != "undefined")
this.set("groupsUrl", this.get("d1CNBaseUrl") + this.get("d1CNService") + "/groups/");
}
if(typeof this.get("d1LogServiceUrl") != "undefined")
this.set('d1LogServiceUrl', this.get('d1CNBaseUrl') + this.get('d1CNService') + '/query/logsolr/?');
this.set("nodeServiceUrl", this.get("d1CNBaseUrl") + this.get("d1CNService") + "/node/");
this.set('resolveServiceUrl', this.get('d1CNBaseUrl') + this.get('d1CNService') + '/resolve/');
// Object format list
if ( typeof this.get("formatsUrl") != "undefined" ) {
this.set("formatsServiceUrl",
this.get("d1CNBaseUrl") + this.get("d1CNService") + this.get("formatsUrl"));
}
//Authentication / portal URLs
this.set('portalUrl', this.get('d1CNBaseUrl') + 'portal/');
this.set('tokenUrl', this.get('portalUrl') + 'token');
//Annotator API
if(typeof this.get("annotatorUrl") !== "undefined")
this.set('annotatorUrl', this.get('d1CNBaseUrl') + 'portal/annotator');
//The sign-in and out URLs - allow these to be turned off by removing them in the defaults above (hence the check for undefined)
if(typeof this.get("signInUrl") !== "undefined"){
this.set("signInUrl", this.get('portalUrl') + "startRequest?target=");
}
if(typeof this.get("signInUrlOrcid") !== "undefined")
this.set("signInUrlOrcid", this.get('portalUrl') + "oauth?action=start&target=");
if(typeof this.get("signInUrlLdap") !== "undefined")
this.set("signInUrlLdap", this.get('portalUrl') + "ldap?target=");
if(this.get('orcidBaseUrl'))
this.set('orcidSearchUrl', this.get('orcidBaseUrl') + '/v1.1/search/orcid-bio?q=');
if((typeof this.get("signInUrl") !== "undefined") || (typeof this.get("signInUrlOrcid") !== "undefined"))
this.set("signOutUrl", this.get('portalUrl') + "logout");
}
//The package service for v2 DataONE API
this.set('packageServiceUrl', this.get('baseUrl') + this.get('context') + this.get('d1Service') + '/packages/application%2Fbagit-097/');
this.on("change:pid", this.changePid);
},
changePid: function(model, name){
this.set("previousPid", model.previous("pid"));
}
});
return AppModel;
});