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@NCI-CGR

NCI-Cancer Genomics Research Lab/FNLCR

Popular repositories

  1. MoCCA-SV MoCCA-SV Public

    A Flexible Ensemble Framework for Structural Variant Analysis

    Python 6 1

  2. cgrHPV16 cgrHPV16 Public

    Python 5 1

  3. TypeSeqHPV TypeSeqHPV Public

    NCI CGR laboratory HPV typing analysis workflows

    R 5 4

  4. GEMSCAN GEMSCAN Public

    Joint variant calling with GATK4 HaplotypeCaller, Google DeepVariant 1.0.0 and Strelka2, coordinated via Snakemake.

    Python 5 7

  5. QIIME_pipeline QIIME_pipeline Public

    CGR's QIIME microbiome pipeline

    Python 3 3

  6. plco-analysis plco-analysis Public

    Primary workflow for the PLCO "Atlas" project

    Shell 2 3

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