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High-Performance Computing at the NIH

Repositories for tools developed by the NIH HPC staff. These tools are made available here as a courtesy, without any guarantee of support


  1. swarm Public

    Swarm is a script designed to simplify submitting a group of commands to the Biowulf cluster.

    HTML 5 6

  2. Materials for a Python in HPC class

    Jupyter Notebook 29 9

  3. example singularity definition files and demos

    Shell 24 11

  4. Class materials for the NIH HPC snakemake class

    Python 14 7

  5. definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster

    Shell 18 4


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