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Releases: xenon-middleware/xenonflow

v1.0.1

26 Oct 19:21
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Version 1.0.1

  • Added cwl compliance check and fixed a bunch of related bugs
  • Reduced logging output
  • Fixed various bugs
  • Fixed a number of crashes related to the tests ran by the compliance test.
  • Fixing output bug when parameter has # in its id
  • Fixing file and directory array location wrangling
  • Fixed directory tests and staging
  • Fixing directory path staging for cwl check: nr85 directory_input_docker

v1.0

19 Oct 13:35
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Version 1.0

  • Various bugfixes
  • Fixed uri's supplied by xenonflow when runing behind a proxy server
  • Updated admin interface to connect to the backend using its current location
  • You can now add xenonflow_jobid or xenonflow_jobname as input to a workflow to be run
    xenonflow will then supply these values automatically.
  • Added XENONFLOW_FILES environment variable for use in the config.yml

Version 1.0-rc1

02 Apr 13:38
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Version 1.0-rc1

  • Lot's of bug fixes!
  • Split SourceFileSystem setting into sourceFileSystem for inputs and cwlFileSystem for workflow storage
  • Added check on job submission whether the referenced workflow exists on the cwlFileSystem
  • Added /workflows api that supplies a list of available workflows in the cwlFileSystem
  • Upgrade admin interface to Angular 11

PROCESS release 0.4

29 Oct 15:32
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This release is part of the final release of the PROCESS services and use cases.

V0.3-alpha

28 Nov 14:09
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V0.3-alpha Pre-release
Pre-release

Fix for the error that was thrown when a job was waiting in the queue.

V0.2-alpha

28 Nov 12:39
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V0.2-alpha Pre-release
Pre-release
  • Output files are now served if they are stored on the local filesystem

    • This requires a new config block with a parameter "hosted" set to true:
  • The configuration now requires a targetFileSystem configuration in addition to a sourceFileSystem
    the output of the workflows are stored in the targetFileSystem

example:
targetFileSystem:
adaptor: file
location: /home/bweel/Documents/projects/xenon-flow/output/
hosted: true

  • Output file paths are now set to this location if used

  • Parsing of cwl has been updated to support Maps in addition to arrays for inputs and outputs

First pre-release

02 Nov 13:40
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First pre-release Pre-release
Pre-release

First alpha release of Xenon-cwl