This repository contains custom scripts used for whole-genome sequencing processing, telomere length estimation, single-cell multiomics data analysis, together with transcription factor analysis.
Mapping read sequences to the human reference genome.
Telseq (https://github.com/zd1/telseq) and Qmotif (https://github.com/AdamaJava/adamajava/tree/master/qmotif) were applied to estimate the telomere length based on the whole-genome sequencing data.
Based on the single-cell RNA-seq data, R package named Scenic (https://github.com/aertslab/SCENIC) was used to perform transcript factor analysis.