added 2 copy() commands #169
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| name: tests | |
| on: | |
| pull_request: | |
| paths: | |
| - '.github/workflows/tests.yml' | |
| - 'R/*' | |
| - 'tests/testthat/*' | |
| push: | |
| paths: | |
| - '.github/workflows/tests.yml' | |
| - 'R/*' | |
| - 'tests/testthat/*' | |
| - 'README.md' | |
| - 'DESCRIPTION' | |
| jobs: | |
| # build: | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - uses: actions/checkout@v2 | |
| # - uses: r-lib/actions/setup-r@v2 | |
| # - uses: r-lib/actions/setup-pandoc@v2 | |
| # - name: Install dependencies | |
| # run: Rscript -e "install.packages(c('testthat', 'tidyverse', 'here'))" | |
| # - name: Run tests | |
| # run: Rscript -e "source('tests/testthat.R')" | |
| tests: | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: false | |
| R_KEEP_PKG_SOURCE: yes | |
| strategy: | |
| matrix: | |
| # os: [macos-latest, ubuntu-latest, windows-latest] | |
| os: [ubuntu-latest] | |
| runs-on: ${{matrix.os}} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: r-lib/actions/setup-r@v2 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Install command line packages | |
| run: | | |
| sudo apt update | |
| sudo apt-get install libcurl4-openssl-dev libgit2-dev | |
| - name: Install dependencies | |
| #run: Rscript -e "install.packages(c('remotes','testthat', 'tidyverse', 'here'))" | |
| run: | | |
| install.packages(c('usethis','remotes','testthat','tidyverse','here','rmarkdown','qpdf','distillery','ggpubr','rlist')) | |
| remotes::install_github("NOAA-EDAB/Rpath") | |
| shell: Rscript {0} | |
| - name: Run tests | |
| #run: Rscript -e "source('tests/testthat.R')" | |
| run: | | |
| source(here::here("data-raw/REcosystem.R")) | |
| source(here::here("tests/testthat.R")) | |
| shell: Rscript {0} | |
| # - name: commit data files | |
| # run: | | |
| # git config user.name github-actions | |
| # git config user.email github-actions@github.com | |
| # file.copy('here::here("tests/testthat/Rplots.pdf")",to=here::here("inst/extdata/Rplots.pdf")) | |
| # git add inst/extdata/Rplots.pdf | |
| # git commit -m "automated commit from testthat yml" | |
| # git push |