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test_GeoMxSet_replacers.R
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test_GeoMxSet_replacers.R
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# dimLabels(testData) should result in "A" "B"
# dimLabels(testData) == labs should result in FALSE FALSE
# design(testData) should result in x ~ y
# design(testData) == des should result in logical(0)
library(GeomxTools)
library(testthat)
testData <- readRDS(file= system.file("extdata", "DSP_NGS_Example_Data",
"demoData.rds", package = "GeomxTools"))
# Spec 8: test that dimLabels(testData) matches the value assigned:------
testthat::test_that("test that dimLabels(testData) matches the value assigned", {
labs <- dimLabels(testData)
dimLabels(testData) <- c("A", "B")
expect_true(all(dimLabels(testData) == c("A", "B")))
expect_false(all(dimLabels(testData) == labs))
})
# Spec 9: test that design(testData) matches the value assigned:------
testthat::test_that("test that design(testData) matches the value assigned", {
des <- design(testData)
expect_null(des)
design(testData) <- "x ~ y"
expect_true(all(design(testData) == c("x ~ y")))
expect_false(identical(design(testData), des))
})
# Spec 10: test that featureType(testData) matches the value assigned:------
testthat::test_that("test that featureType(testData) matches the value assigned", {
featType <- featureType(testData)
featureType(testData) <- "Target"
expect_true(all(featureType(testData) == "Target"))
expect_false(identical(featureType(testData), featType))
})