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biofiletypes

See filterable/searchable rendered version at stephenturner.github.io/biofiletypes.

in development

List of biological file types and their definitions.

Contributing

  1. Fork this repository, clone your fork, and edit data/biofiletypes.csv.
  2. If you're using Excel, make sure to remove the silly MS line endings (e.g., use something like tr '\r' '\n' or this in-place solution). Alternatively, run make in the top directory.
  3. Special note about URLs: if you're including URLs, you can use markdown-style links and run make to convert them to HTML links. If writing raw HTML, be sure to single-quote URLs.
  4. Test that the new file works locally by running this handy python command: python -m SimpleHTTPServer and navigating to http://localhost:8000/.
  5. Commit and push those changes to your fork and submit a pull request.

Dependencies

Rendered in a searchable, filterable HTML table here using derekeder/csv-to-html-table.

  • Bootstrap - Responsive HTML, CSS and Javascript framework
  • jQuery - a fast, small, and feature-rich JavaScript library
  • jQuery CSV - Parse CSV (Comma Separated Values) to Javascript arrays or dictionaries.
  • DataTables - add advanced interaction controls to any HTML table.

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File types and their extensions for biology

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