stop testing cite_data as it takes longer than 5 seconds. Fixed links…

… in vignette

R/site-methods.R

@@ -503,7 +503,8 @@ setMethod(f = "cite_data",
 #' @importFrom purrr map
 #' @importFrom dplyr bind_rows full_join select arrange filter
 #' @returns `data.frame` object with citation information.
-#' @examples {
+#' @examples 
+#' \donttest{
 #' ds <- get_datasets(1)
 #' cite_data(ds)
 #' }

vignettes/neotoma2-package.Rmd

@@ -137,7 +137,7 @@ alex <- get_sites(sitename = "Alexander Lake")
 alex[[1]]$siteid
 ```
 
-The elements within a `site` are the same as the defined columns within the Neotoma [`ndb.sites`](https://open.neotomadb.org/dbschema/tables/sites.html) table, with the exception of the `collunits` slot, which contains the collection units and associated datasets that are found within a site.  You can see all the `site` slots using the `names()` function.  You can select individual elements of a `site`, and you can assign values to these parameters:
+The elements within a `site` are the same as the defined columns within the Neotoma [`ndb.sites`](https://open.neotomadb.org/dbschema/ndb/tables/sites.html) table, with the exception of the `collunits` slot, which contains the collection units and associated datasets that are found within a site.  You can see all the `site` slots using the `names()` function.  You can select individual elements of a `site`, and you can assign values to these parameters:
 
 ```{r showallNamesSite}
 names(alex[[1]])
@@ -325,7 +325,7 @@ In this code chunk we define the bounding polygon for our sites, filter by time
 
 ## Publications
 
-Many Neotoma records have publications associated with them.  The `publication` object (and the `publications` collection) provide the opportunity to do this.  The [`publication`](https://open.neotomadb.org/dbschema/tables/publications.html) table in Neotoma contains an extensive number of fields.  The methods for `publications` in the `neotoma2` package provide us with tools to retrieve publication data from Neotoma, to set and manipulate publication data locally, and to retrieve publication data from external sources (e.g., using a DOI).
+Many Neotoma records have publications associated with them.  The `publication` object (and the `publications` collection) provide the opportunity to do this.  The [`publication`](https://open.neotomadb.org/dbschema/ndb/tables/publications.html) table in Neotoma contains an extensive number of fields.  The methods for `publications` in the `neotoma2` package provide us with tools to retrieve publication data from Neotoma, to set and manipulate publication data locally, and to retrieve publication data from external sources (e.g., using a DOI).
 
 ### `get_publications()` from Neotoma