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GLM updates #130

Merged
merged 22 commits into from
Jul 14, 2020
Merged

GLM updates #130

merged 22 commits into from
Jul 14, 2020

Commits on May 25, 2020

  1. Clean glm_fit, and a tool function to convert signal to mumol.l-1

    @Edouard2laire
    Edouard2laire committed May 25, 2020
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  2. API - first implementation

    @Edouard2laire
    Edouard2laire committed May 25, 2020
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  3. Bug fix - fix name of nst_math_build_basis_dct

    @Edouard2laire
    Edouard2laire committed May 25, 2020
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  4. update manifest

    @Edouard2laire
    Edouard2laire committed May 25, 2020
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  5. Add process to remove noise from short-distance channel

    @Edouard2laire
    Edouard2laire committed May 25, 2020
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  6. Add linear detrend 

    Same output as Brainstorm function
    @Edouard2laire
    Edouard2laire committed May 25, 2020
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  7. Regressor update 

    Normalize the linear regressor; make DCT orthogonal
    @Edouard2laire
    Edouard2laire committed May 25, 2020
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  8. Add DCT in the detrending process

    @Edouard2laire
    Edouard2laire committed May 25, 2020
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Commits on May 26, 2020

  1. Add DCT option for detrending

    @Edouard2laire
    Edouard2laire committed May 26, 2020
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  2. Add model display. 

    Matrix display is ugly but timecourse is fine
    @Edouard2laire
    Edouard2laire committed May 26, 2020
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  3. small upgrade

    @Edouard2laire
    Edouard2laire committed May 26, 2020
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  4. Remove unimplemented options

    @Edouard2laire
    Edouard2laire committed May 26, 2020
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  5. Use GLM inside the GLM process

    @Edouard2laire
    Edouard2laire committed May 26, 2020
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  6. Add utility function to handle output from GLM and simplify GLM process

    @Edouard2laire
    Edouard2laire committed May 26, 2020
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  7. oups

    @Edouard2laire
    Edouard2laire committed May 26, 2020
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  8. Add process to correctly filter regressor in the design matrix

    @Edouard2laire
    Edouard2laire committed May 26, 2020
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Commits on May 27, 2020

  1. GLM - use api to fit the model

    @Edouard2laire
    Edouard2laire committed May 27, 2020
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  2. Update GLM option (add more nuisance regressor)

    @Edouard2laire
    Edouard2laire committed May 27, 2020
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  3. Update Superficial channel 

    Allow to select SSC based on names or source-distance separation
    @Edouard2laire
    Edouard2laire committed May 27, 2020
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Commits on Jun 13, 2020

  1. Better handle signal type (eg HbO,HbR or WL860) when removing superfi… 

    …cial noise
    @Edouard2laire
    Edouard2laire committed Jun 13, 2020
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  2. Better handle output

    @Edouard2laire
    Edouard2laire committed Jun 13, 2020
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Commits on Jun 19, 2020

  1. [DCT] Generate DCT matrix without toolbox

    @Edouard2laire
    Edouard2laire committed Jun 19, 2020
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