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Change PSM ID with identifier in peak file #105

Merged
merged 28 commits into from
Feb 3, 2023
Merged

Change PSM ID with identifier in peak file #105

merged 28 commits into from
Feb 3, 2023

Commits on Dec 2, 2022

  1. Change PSM id with identifier in peak file

    @melihyilmaz
    melihyilmaz committed Dec 2, 2022
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Commits on Dec 3, 2022

  1. Add tensorboard to dependency requirements

    @melihyilmaz
    melihyilmaz committed Dec 3, 2022
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  2. Add unit test for psm id in output

    @melihyilmaz
    melihyilmaz committed Dec 3, 2022
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  3. Add test for PSM id in output mztab

    @melihyilmaz
    melihyilmaz committed Dec 3, 2022
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Commits on Dec 6, 2022

  1. Add newline

    @melihyilmaz
    melihyilmaz committed Dec 6, 2022
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Commits on Jan 13, 2023

  1. Minor refactoring

    @bittremieux
    bittremieux committed Jan 13, 2023
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  2. Whitespace fix 

    Woops.
    @bittremieux
    bittremieux committed Jan 13, 2023
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  3. Debug file content

    @bittremieux
    bittremieux committed Jan 13, 2023
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  4. Why no PSMs? ☹

    @bittremieux
    bittremieux committed Jan 13, 2023
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  5. Test indexed mzML by scan number

    @bittremieux
    bittremieux committed Jan 13, 2023
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  6. Do we have spectra in the index?

    @bittremieux
    bittremieux committed Jan 13, 2023
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  7. Do we predict?

    @bittremieux
    bittremieux committed Jan 13, 2023
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  8. Does prediction end?

    @bittremieux
    bittremieux committed Jan 13, 2023
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  9. Does it work if we only use a single worker?

    @bittremieux
    bittremieux committed Jan 13, 2023
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  10. Revert debugging

    @bittremieux
    bittremieux committed Jan 13, 2023
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  11. Remove debug logging

    @bittremieux
    bittremieux committed Jan 13, 2023
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  12. Create full mzML file

    @bittremieux
    bittremieux committed Jan 13, 2023
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  13. Don't show NumPy RuntimeWarning

    @bittremieux
    bittremieux committed Jan 13, 2023
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  14. Add precursor activation

    @bittremieux
    bittremieux committed Jan 13, 2023
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  15. Update changelog

    @bittremieux
    bittremieux committed Jan 13, 2023
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Commits on Jan 16, 2023

  1. Write full peak filenames to mzTab

    @bittremieux
    bittremieux committed Jan 16, 2023
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  2. Correctly match spectra to runs

    @bittremieux
    bittremieux committed Jan 16, 2023
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  3. Fix linting issues

    @bittremieux
    bittremieux committed Jan 16, 2023
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  4. Fix unit tests

    @bittremieux
    bittremieux committed Jan 16, 2023
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  5. Update changelog

    @bittremieux
    bittremieux committed Jan 16, 2023
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Commits on Feb 3, 2023

  1. Update CHANGELOG.md

    @melihyilmaz
    melihyilmaz committed Feb 3, 2023
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  2. Merge branch 'main' into scan_id

    @melihyilmaz
    melihyilmaz committed Feb 3, 2023
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  3. Fix lint

    @melihyilmaz
    melihyilmaz committed Feb 3, 2023
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